RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SSR3Q9UNL2 185 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 NOTOA8MTQ0 251 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 G3V4G9 280 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 AP4M1O00189 453 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 RAB29O14966 203 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 HSPA12AO43301 675 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 GADD45AP24522 165 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 SAMD5Q5TGI4 173 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 TPRA1Q86W33 373 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 EDARADDQ8WWZ3 215 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 GHITMQ9H3K2 345 aa18.79■□□□□ 0.6
CDR2-202ENST00000561630 PRKDCP78527 4128 aaKnown RBP18.78■□□□□ 0.6
CDR2-202ENST00000561630 IGKV1-6A0A0C4DH72 117 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 SMIM30A4D0T7 59 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 METTL21EPA6NDL7 271 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 TRDCB7Z8K6 153 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 MFNGO00587 321 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 CD3GP09693 182 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 PF4V1P10720 104 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 SLC2A2P11168 524 aaPredicted RBP18.78■□□□□ 0.6
CDR2-202ENST00000561630 HIST1H1DP16402 221 aaKnown RBP18.78■□□□□ 0.6
CDR2-202ENST00000561630 ACTBP60709 375 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 SLC35B1P78383 322 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 MRPS15P82914 257 aaKnown RBP18.78■□□□□ 0.6
CDR2-202ENST00000561630 MMDQ15546 238 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 KHDC1LQ5JSQ8 128 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 COMMD1Q8N668 190 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 C11orf54Q9H0W9 315 aaPredicted RBP18.78■□□□□ 0.6
CDR2-202ENST00000561630 OR51E2Q9H255 320 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 TGP01266 2768 aa18.78■□□□□ 0.6
CDR2-202ENST00000561630 GNB3P16520 340 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 SOX6P35712 828 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 BEAN1Q3B7T3 259 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 RPL39P5Q59GN2 51 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 WFDC9Q8NEX5 89 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 ABHD14BQ96IU4 210 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 RITA1Q96K30 269 aa18.77■□□□□ 0.6
CDR2-202ENST00000561630 FCGR3AP08637 254 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 CT45A6P0DMU7 189 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 CT45A5P0DMU8 189 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 CT45A7P0DMV0 189 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 KPRPQ5T749 579 aaPredicted RBP18.76■□□□□ 0.59
CDR2-202ENST00000561630 OR4A4PQ8NGN8 299 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 PHF21AQ96BD5 680 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 KCTD7Q96MP8 289 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 HSPB9Q9BQS6 159 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 GON7Q9BXV9 100 aa18.76■□□□□ 0.59
CDR2-202ENST00000561630 FABP7O15540 132 aa18.75■□□□□ 0.59
CDR2-202ENST00000561630 KIR2DS1Q14954 304 aa18.75■□□□□ 0.59
CDR2-202ENST00000561630 NEDD8Q15843 81 aa18.75■□□□□ 0.59
CDR2-202ENST00000561630 ZFP57Q9NU63 452 aa18.75■□□□□ 0.59
CDR2-202ENST00000561630 A0A075B6Q4 140 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
CDR2-202ENST00000561630 SERPINB10P48595 397 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 RPL23AP62750 156 aaKnown RBP18.74■□□□□ 0.59
CDR2-202ENST00000561630 PNLIPRP3Q17RR3 467 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 SFXN4Q6P4A7 337 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 TEX38Q6PEX7 206 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 NPBQ8NG41 125 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 CHCHD6Q9BRQ6 235 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 TOLLIPQ9H0E2 274 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 ATG5Q9H1Y0 275 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 RDH8Q9NYR8 311 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 ZNF107Q9UII5 783 aaPredicted RBP18.74■□□□□ 0.59
CDR2-202ENST00000561630 DAPK2Q9UIK4 370 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 ZNF580Q9UK33 172 aa18.74■□□□□ 0.59
CDR2-202ENST00000561630 OR5H14A6NHG9 310 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 NBR2O15453 112 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 DIRAS3O95661 229 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 PF4P02776 101 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 IGF1P05019 195 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 CNTFRP26992 372 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 SDC2P34741 201 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 ARL6IP1Q15041 203 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 OXLD1Q5BKU9 147 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 FAM131AQ6UXB0 335 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 CABLES2Q9BTV7 478 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 RNF150Q9ULK6 438 aa18.73■□□□□ 0.59
CDR2-202ENST00000561630 H0YJW9 148 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 PLXNB1O43157 2135 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 PROP1O75360 226 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 HLA-DRB1P01911 266 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 CD36P16671 472 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 CD33P20138 364 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 MC5RP33032 325 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 SRSF7Q16629 238 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDR2-202ENST00000561630 C5orf64Q2M2E5 130 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 GLDNQ6ZMI3 551 aaPredicted RBP18.72■□□□□ 0.59
CDR2-202ENST00000561630 OR5AN1Q8NGI8 311 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDR2-202ENST00000561630 ZNF230Q9UIE0 474 aaPredicted RBP18.72■□□□□ 0.59
CDR2-202ENST00000561630 ZNF221Q9UK13 617 aa18.72■□□□□ 0.59
CDR2-202ENST00000561630 NDUFA3O95167 84 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 GSTT2P0CG29 244 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 GSTT2BP0CG30 244 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 SNRPBP14678 240 aaKnown RBP18.71■□□□□ 0.59
CDR2-202ENST00000561630 SLC6A1P30531 599 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 CFHR3Q02985 330 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 ARFRP1Q13795 201 aa18.71■□□□□ 0.59
CDR2-202ENST00000561630 IGSF11Q5DX21 431 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms