RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
TPM1-232ENST00000561425 MRPL20Q9BYC9 149 aaKnown RBP16.29■□□□□ 0.2
TPM1-232ENST00000561425 PIPOXQ9P0Z9 390 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 ZNF580Q9UK33 172 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 IGKV1-6A0A0C4DH72 117 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 SERPINE3A8MV23 424 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 RAB29O14966 203 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 ZBTB25P24278 435 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 ZNF329Q86UD4 541 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 TPRA1Q86W33 373 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 COMMD1Q8N668 190 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 OR10R2Q8NGX6 335 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 SETD6Q8TBK2 473 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 RAB3CQ96E17 227 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 RITA1Q96K30 269 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 PARP12Q9H0J9 701 aaKnown RBP16.28■□□□□ 0.2
TPM1-232ENST00000561425 NOTCH1P46531 2555 aa16.28■□□□□ 0.2
TPM1-232ENST00000561425 NOTOA8MTQ0 251 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 TRDCB7Z8K6 153 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 G3V4G9 280 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 MFNGO00587 321 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 ST8SIA5O15466 376 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 PROP1O75360 226 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 FOXRED2Q8IWF2 684 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 NPBQ8NG41 125 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 OR13F1Q8NGS4 319 aa16.27■□□□□ 0.2
TPM1-232ENST00000561425 C11orf54Q9H0W9 315 aaPredicted RBP16.27■□□□□ 0.2
TPM1-232ENST00000561425 A0A0B4J203 849 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 AP4M1O00189 453 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 PLXNB1O43157 2135 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 CT45A6P0DMU7 189 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 CT45A5P0DMU8 189 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 CT45A7P0DMV0 189 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 CEACAM6P40199 344 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 SRSF7Q16629 238 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-232ENST00000561425 TIMM50Q3ZCQ8 353 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 C1QL4Q86Z23 238 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 YIPF6Q96EC8 236 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 RASL11BQ9BPW5 248 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-232ENST00000561425 ZFP57Q9NU63 452 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 OR1A1Q9P1Q5 309 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 LINC00527Q9UJ94 153 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 SSR3Q9UNL2 185 aa16.26■□□□□ 0.19
TPM1-232ENST00000561425 A0A1W2PRX2 142 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 DIRAS3O95661 229 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 IGF1P05019 195 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 SLC2A2P11168 524 aaPredicted RBP16.25■□□□□ 0.19
TPM1-232ENST00000561425 HIST1H1DP16402 221 aaKnown RBP16.25■□□□□ 0.19
TPM1-232ENST00000561425 ACTBP60709 375 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 CFHR3Q02985 330 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 RNF152Q8N8N0 203 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 OR5AN1Q8NGI8 311 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 OR4A4PQ8NGN8 299 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 HSPB9Q9BQS6 159 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 OR51E2Q9H255 320 aa16.25■□□□□ 0.19
TPM1-232ENST00000561425 METTL21EPA6NDL7 271 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 NDUFA3O95167 84 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 GADD45AP24522 165 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 SOX6P35712 828 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 RPL23AP62750 156 aaKnown RBP16.24■□□□□ 0.19
TPM1-232ENST00000561425 SLC35B1P78383 322 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 PNLIPRP3Q17RR3 467 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 RPL39P5Q59GN2 51 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 Q6ZS49 121 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 ABHD14BQ96IU4 210 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 GON7Q9BXV9 100 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 GAB2Q9UQC2 676 aa16.24■□□□□ 0.19
TPM1-232ENST00000561425 FCGR3AP08637 254 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 CD3GP09693 182 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 GNB3P16520 340 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 SLC6A1P30531 599 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 SERPINB10P48595 397 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 PHF21AQ96BD5 680 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 CHCHD6Q9BRQ6 235 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 CABLES2Q9BTV7 478 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 FUNDC2Q9BWH2 189 aa16.23■□□□□ 0.19
TPM1-232ENST00000561425 LOC100506127A0A0U1RQW1 187 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 OR5H14A6NHG9 310 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 H0YJW9 148 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 FABP7O15540 132 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 HLA-DRB1P01911 266 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 CNTFRP26992 372 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 MC5RP33032 325 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 MMDQ15546 238 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 OXLD1Q5BKU9 147 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 GPR107Q5VW38 600 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 TEX38Q6PEX7 206 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 KCTD7Q96MP8 289 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 RNF5Q99942 180 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 RDH8Q9NYR8 311 aa16.22■□□□□ 0.19
TPM1-232ENST00000561425 TRBV6-7A0A0A0MS04 114 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 SMIM30A4D0T7 59 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 NBR2O15453 112 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 HSPA12AO43301 675 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 AIREO43918 545 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 IGHG4P01861 327 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 GSTT2P0CG29 244 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 GSTT2BP0CG30 244 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms