RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 HAGHQ16775 308 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 OR2G6Q5TZ20 316 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 AWAT2Q6E213 333 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 SIGIRRQ6IA17 410 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 UNQ5815/PRO19632Q6UWF5 114 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 CBR4Q8N4T8 237 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 OR2AK2Q8NG84 335 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 SMIM19Q96E16 107 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 FAM103A1Q9BTL3 118 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 CKLFQ9UBR5 152 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
CDC42BPB-205ENST00000559245 IFNA6P05013 189 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 Q499Y3 187 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 AKIRIN2Q53H80 203 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 FAM71F2Q6NXP2 309 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 LFNGQ8NES3 379 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 APH1BQ8WW43 257 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 GALMQ96C23 342 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 Q96M66 194 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 RDH12Q96NR8 316 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 IFI27L2Q9H2X8 130 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 SLA2Q9H6Q3 261 aa12.44□□□□□ -0.42
CDC42BPB-205ENST00000559245 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 JTBO76095 146 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 CT45A6P0DMU7 189 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 CT45A5P0DMU8 189 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 CT45A7P0DMV0 189 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 FSTP19883 344 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 CD40LGP29965 261 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 GLDNQ6ZMI3 551 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 GHSRQ92847 366 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 PIPOXQ9P0Z9 390 aa12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-205ENST00000559245 LOC100130705A0A1B0GUX0 176 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 OR5H14A6NHG9 310 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 CASQ2O14958 399 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 ST8SIA5O15466 376 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 PDCD6O75340 191 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 BAG2O95816 211 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 LALBAP00709 142 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 TRGV3P03979 118 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 RPS11P62280 158 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 SMN1Q16637 294 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 RPL39P5Q59GN2 51 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 C6orf141Q5SZD1 244 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 DMKNQ6E0U4 476 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 PQLC1Q8N2U9 271 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 OR14A2Q96R54 314 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 RANGRFQ9HD47 186 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 ALMS1Q8TCU4 4167 aa12.42□□□□□ -0.42
CDC42BPB-205ENST00000559245 H0YJW9 148 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 H7C2Y5 167 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 RAB29O14966 203 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 TFAP2AP05549 437 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 ZP3P21754 424 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 DCKP27707 260 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 MC5RP33032 325 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 RCN1Q15293 331 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 HMGN3Q15651 99 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 YIF1BQ5BJH7 314 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 CDH26Q8IXH8 852 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 IL1F10Q8WWZ1 152 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 ABRACLQ9P1F3 81 aa12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 METTL1Q9UBP6 276 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-205ENST00000559245 TRBV5-7A0A0A0MS05 114 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 H0Y980 276 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 RBBP9O75884 186 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 CA2P00918 260 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 ZFP41Q8N8Y5 198 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 PGLYRP3Q96LB9 341 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 TUBA4BQ9H853 241 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 WASHC3Q9Y3C0 194 aa12.4□□□□□ -0.42
CDC42BPB-205ENST00000559245 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 WBP4O75554 376 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 CAPGP40121 348 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 KLF5Q13887 457 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 PSG5Q15238 335 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
CDC42BPB-205ENST00000559245 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms