RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 GNB4Q9HAV0 340 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 PLGRKTQ9HBL7 147 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 SLC23A1Q9UHI7 598 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 LSM2Q9Y333 95 aaKnown RBP11.41□□□□□ -0.58
SHMT2-235ENST00000557740 OR5H14A6NHG9 310 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 NDUFA3O95167 84 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 ZNF616Q08AN1 781 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 P2RY14Q15391 338 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 RPL39P5Q59GN2 51 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 LIPKQ5VXJ0 399 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 ZNF491Q8N8L2 437 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 OR1N2Q8NGR9 330 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 TMEM203Q969S6 136 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 WWC2-AS2Q96NR7 200 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
SHMT2-235ENST00000557740 RIMS4Q9H426 269 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-235ENST00000557740 MGAT4AQ9UM21 535 aa11.4□□□□□ -0.58
SHMT2-235ENST00000557740 TENM3Q9P273 2699 aa11.4□□□□□ -0.59
SHMT2-235ENST00000557740 H7C2Y5 167 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 I3L521 148 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 RRHO14718 337 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 HSPA12AO43301 675 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 HSMCR30P0CW71 290 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 ARSBP15848 533 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 QRFPP83859 136 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 RUNX1Q01196 453 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 ZNF880Q6PDB4 577 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 FBXL15Q9H469 300 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 C12orf4Q9NQ89 552 aa11.39□□□□□ -0.59
SHMT2-235ENST00000557740 COL7A1Q02388 2944 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 NBEAL2Q6ZNJ1 2754 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 TRBV6-6A0A0A6YYG2 114 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 A0A1W2PN81 502 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 H0YJW9 148 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 SLC17A2O00624 439 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 RBBP9O75884 186 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 ARL6IP5O75915 188 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 LY86O95711 162 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 GSTP1P09211 210 aaKnown RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 ZBTB25P24278 435 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 MC5RP33032 325 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 CHRNA7P36544 502 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 RAB9AP51151 201 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 INSL3P51460 131 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 GNB1P62873 340 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 HLA-DRB3P79483 266 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 NDPQ00604 133 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 IRF3Q14653 427 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 RAB11BQ15907 218 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 GLDNQ6ZMI3 551 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 EDARADDQ8WWZ3 215 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 ABHD14BQ96IU4 210 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 PARP12Q9H0J9 701 aaKnown RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 LPAR5Q9H1C0 372 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 GHITMQ9H3K2 345 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 OR1A1Q9P1Q5 309 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 AK3Q9UIJ7 227 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-235ENST00000557740 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 TPRKBQ9Y3C4 175 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 A3GALT2U3KPV4 340 aa11.38□□□□□ -0.59
SHMT2-235ENST00000557740 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 SOCS1O15524 211 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 CT45A6P0DMU7 189 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 CT45A5P0DMU8 189 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 CT45A7P0DMV0 189 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 PSMA1P25786 263 aaKnown RBP11.37□□□□□ -0.59
SHMT2-235ENST00000557740 CEACAM6P40199 344 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 AQP4P55087 323 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 RPS25P62851 125 aaKnown RBP11.37□□□□□ -0.59
SHMT2-235ENST00000557740 CX3CL1P78423 397 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 KIAA0141Q14154 515 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-235ENST00000557740 TRAM1Q15629 374 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 ZNF660Q6AZW8 331 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-235ENST00000557740 TCTEX1D1Q8N7M0 179 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 ISYNA1Q9NPH2 558 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 RNF150Q9ULK6 438 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
SHMT2-235ENST00000557740 U3KQK5 164 aa11.37□□□□□ -0.59
SHMT2-235ENST00000557740 ANKRD65E5RJM6 399 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 OVOL1O14753 267 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 RGS10O43665 173 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 CD37P11049 281 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 RANBP1P43487 201 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-235ENST00000557740 TMEM267Q0VDI3 215 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-235ENST00000557740 TPBGQ13641 420 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 ASPHD1Q5U4P2 390 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 DCUN1D4Q92564 292 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 GFI1Q99684 422 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms