RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 UBE2MP61081 183 aaKnown RBP9.17□□□□□ -0.94
SHMT2-220ENST00000555634 IFITM3Q01628 133 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 SLC25A48Q6ZT89 311 aaKnown RBP9.17□□□□□ -0.94
SHMT2-220ENST00000555634 NRARPQ7Z6K4 114 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 LHFPL1Q86WI0 220 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 MARCH1Q8TCQ1 289 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 LEAP2Q969E1 77 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 LHX4Q969G2 390 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 RPEQ96AT9 228 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 C18orf12Q96KH6 178 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 MMP26Q9NRE1 261 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 TBL2Q9Y4P3 447 aaKnown RBP9.17□□□□□ -0.94
SHMT2-220ENST00000555634 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 ARHGAP32A7KAX9 2087 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 TRAV6A0A075B6T7 132 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 LEUTXA8MZ59 168 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 HSD17B6O14756 317 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 ARPC1BO15143 372 aaKnown RBP9.16□□□□□ -0.94
SHMT2-220ENST00000555634 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 PRAF2O60831 178 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 PEX14O75381 377 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 B3GALNT1O75752 331 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 APOA2P02652 100 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 CTSDP07339 412 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-220ENST00000555634 H2AFB2P0C5Z0 115 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF735P0CB33 412 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 HOXB4P17483 251 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-220ENST00000555634 HTR1DP28221 377 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 UBE2E1P51965 193 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 BPIFB3P59826 476 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 SRPXP78539 464 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 PAX2Q02962 417 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 PAX8Q06710 450 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 BAMBIQ13145 260 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 HLA-DRB5Q30154 266 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 MIDNQ504T8 468 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 C4orf46Q504U0 113 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 AADACL3Q5VUY0 350 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF660Q6AZW8 331 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-220ENST00000555634 SGPP2Q8IWX5 399 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 LINC00311Q8N616 119 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
SHMT2-220ENST00000555634 SLC2A9Q9NRM0 540 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 KCNIP3Q9Y2W7 256 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 C2CD3Q4AC94 2353 aa9.16□□□□□ -0.94
SHMT2-220ENST00000555634 FLNAP21333 2647 aaKnown RBP9.15□□□□□ -0.94
SHMT2-220ENST00000555634 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 OOSP1A8MZH6 123 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 MMP23AO75900 390 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-220ENST00000555634 AKR1C4P17516 323 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 VAMP1P23763 118 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 BTCP35070 178 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 KIR2DS2P43631 304 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 THBS3P49746 956 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 RAB13P51153 203 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 RAG2P55895 527 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 PIGPP57054 158 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 TAGLNQ01995 201 aaKnown RBP9.15□□□□□ -0.94
SHMT2-220ENST00000555634 RTL8BQ17RB0 113 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 PHLDA2Q53GA4 152 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 MINOS1Q5TGZ0 78 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF626Q68DY1 528 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 TGIF2LXQ8IUE1 241 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 Q8N7P7 452 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 NANPQ8TBE9 248 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 TCTEX1D2Q8WW35 142 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 UPRTQ96BW1 309 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 RSRP1Q9BUV0 290 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 IFI27L2Q9H2X8 130 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 FAM96BQ9Y3D0 163 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 MINOS1-NBL1R4GNA1 71 aa9.15□□□□□ -0.94
SHMT2-220ENST00000555634 A0A1W2PPE3 182 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 M0R1X1 148 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 CD5LO43866 347 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 ATG12O94817 140 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 HLA-AP01891 365 aaKnown RBP9.14□□□□□ -0.95
SHMT2-220ENST00000555634 GAPDHP04406 335 aaKnown RBP9.14□□□□□ -0.95
SHMT2-220ENST00000555634 MMP9P14780 707 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 RAB25P57735 213 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 KLRD1Q13241 179 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 TMEM128Q5BJH2 165 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 CT45A1Q5HYN5 189 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 CCBE1Q6UXH8 406 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-220ENST00000555634 SPNS3Q6ZMD2 512 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF66Q6ZN08 573 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 DRAM1Q8N682 238 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 TCTEX1D1Q8N7M0 179 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF439Q8NDP4 499 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 BVESQ8NE79 360 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 CT45A3Q8NHU0 189 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms