RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SPCS3P61009 180 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 HERV-K104P61576 105 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF85Q03923 595 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 KRTAP1-1Q07627 177 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 GNMTQ14749 295 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 RAB11BQ15907 218 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 HIST3H3Q16695 136 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 C2orf68Q2NKX9 166 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 TRIM16LQ309B1 348 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 Q499Y3 187 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 PHLDA2Q53GA4 152 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 CXorf66Q5JRM2 361 aaPredicted RBP2.04□□□□□ -2.08
PRPF39-205ENST00000554081 TEX30Q5JUR7 227 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF691Q5VV52 312 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 NCR3LG1Q68D85 454 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 KDM4DQ6B0I6 523 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 HCP5Q6MZN7 132 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 SLC16A12Q6ZSM3 486 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 KCTD9Q7L273 389 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 KCTD20Q7Z5Y7 419 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 OR14K1Q8NGZ2 314 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 SNX22Q96L94 193 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 NICN1Q9BSH3 213 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 JAM3Q9BX67 310 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 G6PC2Q9NQR9 355 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 FAM206AQ9NX38 181 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 IL36GQ9NZH8 169 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 VPREB3Q9UKI3 123 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 HSF4Q9ULV5 492 aa2.04□□□□□ -2.08
PRPF39-205ENST00000554081 DMBT1Q9UGM3 2413 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV3-66A0A0C4DH42 116 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SEC14L6B5MCN3 397 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 J3QLI3 93 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SOCS1O15524 211 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ARL6IP5O75915 188 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 TXNDC12O95881 172 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 LALBAP00709 142 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 KRASP01116 189 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV3-20P01619 116 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 HBZP02008 142 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 APOA2P02652 100 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 TRGV3P03979 118 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 GAPDHP04406 335 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV1-8P0DP01 117 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 AREGP15514 252 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF12P17014 697 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 PSMB6P28072 239 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 HTR2CP28335 458 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 CD200P41217 278 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 RFX2P48378 723 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 HMGA2P52926 109 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 EMP1P54849 157 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 WNT4P56705 351 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 RPS25P62851 125 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 EMX1Q04741 257 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 DCTN2Q13561 401 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 FHL1Q13642 323 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ACTBL2Q562R1 376 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 TOR2AQ5JU69 321 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SLC25A30Q5SVS4 291 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 AADACL3Q5VUY0 350 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ASPHD2Q6ICH7 369 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR52W1Q6IF63 320 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 GDPGP1Q6ZNW5 385 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF788Q6ZQV5 615 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR2W3Q7Z3T1 314 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SLC38A6Q8IZM9 456 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SAMD12Q8N8I0 201 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 BVESQ8NE79 360 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR11H1Q8NG94 326 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR10J5Q8NHC4 309 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ARPC1AQ92747 370 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ERGIC1Q969X5 290 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 NTNG2Q96CW9 530 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 NMD3Q96D46 503 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 RAB3CQ96E17 227 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 C5orf30Q96GV9 206 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ARHGAP5-AS1Q96IT6 56 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 CCDC140Q96MF4 163 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF75AQ96N20 296 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 P2RX4Q99571 388 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 NRIP2Q9BQI9 281 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 ANKRD60Q9BZ19 345 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 CHST5Q9GZS9 411 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR2D2Q9H210 308 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 TMEM133Q9H2Q1 129 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 RIMS4Q9H426 269 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 RNF167Q9H6Y7 350 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 AUNIPQ9H7T9 357 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 PNRC2Q9NPJ4 139 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 MGAT4AQ9UM21 535 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 STRAPQ9Y3F4 350 aaKnown RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 SIRT4Q9Y6E7 314 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV1-9A0A0C4DH69 117 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV1-12A0A0C4DH73 117 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 TEX13DA0A0J9YY54 714 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-205ENST00000554081 LINC01548A6NM66 108 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 OR4C45A6NMZ5 311 aa2.03□□□□□ -2.08
PRPF39-205ENST00000554081 J3QW42 95 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms