RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 LGALS8O00214 317 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 CCL21O00585 134 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 SIGLEC5O15389 551 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 RBFOX2O43251 390 aaKnown RBP eCLIP6.08□□□□□ -1.44
ATXN3-221ENST00000553498 FGF16O43320 207 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 ADAM20O43506 726 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 PITX3O75364 302 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 SCGB1D2O95969 90 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 EGR1P18146 543 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 AGAP20933 346 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 GLIPR1P48060 266 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 RAB5CP51148 216 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 TMEM33P57088 247 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 VAMP2P63027 116 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 TLE1Q04724 770 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 UQCC3Q6UW78 93 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 COMMD7Q86VX2 200 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 PRR18Q8N4B5 295 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF808Q8N4W9 903 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-221ENST00000553498 OR2C3Q8N628 320 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 OR13A1Q8NGR1 328 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 OR51H1Q8NH63 302 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 OR1L1Q8NH94 360 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 MRGPRDQ8TDS7 321 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 ZCCHC14Q8WYQ9 949 aaKnown RBP6.08□□□□□ -1.44
ATXN3-221ENST00000553498 RAB39BQ96DA2 213 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 SAP30LQ9HAJ7 183 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 KCNJ16Q9NPI9 418 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 LYRM2Q9NU23 88 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-221ENST00000553498 TAS2R3Q9NYW6 316 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 CLN8Q9UBY8 286 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 SH3BGRL2Q9UJC5 107 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 LSM5Q9Y4Y9 91 aaKnown RBP6.08□□□□□ -1.44
ATXN3-221ENST00000553498 MMP24Q9Y5R2 645 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 WSB1Q9Y6I7 421 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 CACNA1CQ13936 2221 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 MED13Q9UHV7 2174 aa6.08□□□□□ -1.44
ATXN3-221ENST00000553498 CFAP47Q6ZTR5 3102 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 NCOA6Q14686 2063 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 PPIAL4EA0A075B759 164 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 IGHV3-64DA0A0J9YX35 117 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 hADV38S2A0JD32 116 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 RAB19A4D1S5 217 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 MFSD2BA6NFX1 497 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 MSGN1A6NI15 193 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 SHISA9B4DS77 424 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 PPIAL4DF5H284 164 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 TEX46H3BTG2 121 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 WRBO00258 174 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 TOR1AO14656 332 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 MED6O75586 246 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 DFFBO76075 338 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 SEC11BP0C7V7 166 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 PPIAL4FP0DN26 164 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CGB3P0DN86 165 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CGB7P0DN87 165 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CEBPDP49716 269 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 RPL23AP62750 156 aaKnown RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 EIF4EBP1Q13541 118 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 MORN2Q502X0 79 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 MIDNQ504T8 468 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 RNASE11Q8TAA1 199 aaKnown RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CA5BP1Q8WTZ4 195 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 FAM168AQ92567 244 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 ADTRPQ96IZ2 230 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 AGMATQ9BSE5 352 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 OR2D2Q9H210 308 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 ARV1Q9H2C2 271 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 GAL3ST2Q9H3Q3 398 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 C11orf1Q9H5F2 150 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 DYNLRB1Q9NP97 96 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 SDHAF2Q9NX18 166 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CALYQ9NYX4 217 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 GNG12Q9UBI6 72 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 KAAG1Q9UBP8 84 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 RNF115Q9Y4L5 304 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 PPIAL4AQ9Y536 164 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 LINC00312Q9Y6C7 94 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 PHF3Q92576 2039 aaKnown RBP6.07□□□□□ -1.44
ATXN3-221ENST00000553498 CACNA1GO43497 2377 aa6.07□□□□□ -1.44
ATXN3-221ENST00000553498 A8MXK9 166 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 TMEM178BH3BS89 294 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 TNFSF12O43508 249 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 CLDN14O95500 239 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 CLDN1O95832 211 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 FGF2P09038 288 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 SSTR5P35346 364 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 AKR1C2P52895 323 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 EDDM3BP56851 147 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 MRPS11P82912 194 aaKnown RBP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 EWSR1Q01844 656 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-221ENST00000553498 EDDM3AQ14507 147 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 AANATQ16613 207 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF585BQ52M93 769 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 ADAM5Q6NVV9 412 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 IL34Q6ZMJ4 242 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 STX12Q86Y82 276 aa6.06□□□□□ -1.44
ATXN3-221ENST00000553498 FOXRED2Q8IWF2 684 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms