RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 NUBP2Q9Y5Y2 271 aa5.52□□□□□ -1.53
ATXN3-219ENST00000553488 MUC4Q99102 2169 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 PRSS47A8MTI9 375 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 AIPO00170 330 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 DYNC1I1O14576 645 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ARPC1BO15143 372 aaKnown RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 RGS11O94810 467 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 CDRT1O95170 752 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 HBZP02008 142 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 CALB2P22676 271 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 POLR2IP36954 125 aaKnown RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ADARB1P78563 741 aaKnown RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 RAB40BQ12829 278 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 GNMTQ14749 295 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 RSU1Q15404 277 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 MPV17LQ2QL34 196 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 HSP90B2PQ58FF3 399 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 RNLSQ5VYX0 342 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF660Q6AZW8 331 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 PYHIN1Q6K0P9 492 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 LIN54Q6MZP7 749 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF833PQ6ZTB9 187 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 KCTD20Q7Z5Y7 419 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 SPATA24Q86W54 205 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ANKRD13BQ86YJ7 626 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 SERPINA12Q8IW75 414 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 OR5D14Q8NGL3 314 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 OR8J1Q8NGP2 316 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 RGP1Q92546 391 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 CPNE2Q96FN4 548 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-219ENST00000553488 NSL1Q96IY1 281 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 C4orf36Q96KX1 117 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 CIB1Q99828 191 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF251Q9BRH9 671 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ABHD14AQ9BUJ0 271 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 ELOVL1Q9BW60 279 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 GABARAPL3Q9BY60 117 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 FAM192AQ9GZU8 254 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 GNG12Q9UBI6 72 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 GAB2Q9UQC2 676 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 CEPT1Q9Y6K0 416 aa5.51□□□□□ -1.53
ATXN3-219ENST00000553488 PKD1P98161 4303 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 SAA2-SAA4A0A096LPE2 208 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 A0A1W2PP11 408 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 IZUMO1RA6ND01 250 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 SAA2P0DJI9 122 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-219ENST00000553488 RAB3AP20336 220 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 ATP6V1E1P36543 226 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 OR3A3P47888 321 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 TPPP2P59282 170 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 CX3CL1P78423 397 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 KLF5Q13887 457 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-219ENST00000553488 FLOT2Q14254 428 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 ATP6AP1Q15904 470 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 MORN2Q502X0 79 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 SYT6Q5T7P8 510 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-219ENST00000553488 OR9G4Q8NGQ1 327 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 OR4K15Q8NH41 348 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 OR52N1Q8NH53 320 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 RFKQ969G6 155 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 GPER1Q99527 375 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 PDCD1LG2Q9BQ51 273 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 FAM103A1Q9BTL3 118 aaKnown RBP5.5□□□□□ -1.53
ATXN3-219ENST00000553488 THTPAQ9BU02 230 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 TMED9Q9BVK6 235 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 FBXL15Q9H469 300 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 RIBC2Q9H4K1 309 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 SLA2Q9H6Q3 261 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 PLEKHA3Q9HB20 300 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 TAS2R4Q9NYW5 299 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 CNOT2Q9NZN8 540 aaKnown RBP5.5□□□□□ -1.53
ATXN3-219ENST00000553488 DHDHQ9UQ10 334 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 A3GALT2U3KPV4 340 aa5.5□□□□□ -1.53
ATXN3-219ENST00000553488 HSPG2P98160 4391 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 DAPL1A0PJW8 107 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 TMEM212A6NML5 194 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 E9PI62 339 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 H0Y980 276 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 J3QLW9 94 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 FCN1O00602 326 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 RRHO14718 337 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SPINT2O43291 252 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SC5DO75845 299 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 BRI3O95415 125 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 CSTBP04080 98 aaKnown RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 CSN3P07498 182 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF19P17023 458 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 RCC1P18754 421 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SERPINA2P20848 420 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ZP3P21754 424 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 PPP1CCP36873 323 aaKnown RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ALDH3A2P51648 485 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SSBP2P81877 361 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 AKIRIN2Q53H80 203 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ACTBL2Q562R1 376 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ATAD3CQ5T2N8 411 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 C6orf183Q5T699 404 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 LCN12Q6JVE5 192 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms