RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 SERTAD4Q9NUC0 356 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 BET1O15155 118 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 GABARAPO95166 117 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 VSIG10L2P0DP72 767 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 SRSF4Q08170 494 aaKnown RBP20.69■□□□□ 0.9
CPSF6-205ENST00000550075 HERPUD1Q15011 391 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 ZNF260Q3ZCT1 412 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 OR10J5Q8NHC4 309 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 MAFIPQ8WZ33 124 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 MRPL20Q9BYC9 149 aaKnown RBP20.69■□□□□ 0.9
CPSF6-205ENST00000550075 C11orf54Q9H0W9 315 aaPredicted RBP20.69■□□□□ 0.9
CPSF6-205ENST00000550075 DCSTAMPQ9H295 470 aa20.69■□□□□ 0.9
CPSF6-205ENST00000550075 ZNF230Q9UIE0 474 aaPredicted RBP20.69■□□□□ 0.9
CPSF6-205ENST00000550075 IGKV1-6A0A0C4DH72 117 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 KRTAP10-3P60369 221 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 C9orf152Q5JTZ5 239 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 UBE2NLQ5JXB2 153 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 OR8H1Q8NGG4 311 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 NUDCD2Q8WVJ2 157 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 GINS4Q9BRT9 223 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 PARP12Q9H0J9 701 aaKnown RBP20.68■□□□□ 0.9
CPSF6-205ENST00000550075 RDH8Q9NYR8 311 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 ZNF221Q9UK13 617 aa20.68■□□□□ 0.9
CPSF6-205ENST00000550075 TRAV18A0A075B6X5 111 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 M0QZ24 198 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 GSTT2P0CG29 244 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 GSTT2BP0CG30 244 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 OR3A3P47888 321 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 Q8N6K4 173 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 C5orf56Q8N8D9 126 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 S100A16Q96FQ6 103 aaKnown RBP20.67■□□□□ 0.9
CPSF6-205ENST00000550075 NABP2Q9BQ15 211 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 TOLLIPQ9H0E2 274 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 ABCG5Q9H222 651 aa20.67■□□□□ 0.9
CPSF6-205ENST00000550075 ELF5Q9UKW6 265 aaPredicted RBP20.67■□□□□ 0.9
CPSF6-205ENST00000550075 TRBV6-7A0A0A0MS04 114 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 ALDH3B2P48448 385 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 IGSF11Q5DX21 431 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 GPR107Q5VW38 600 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 SAMD12Q8N8I0 201 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 ABHD14BQ96IU4 210 aa20.66■□□□□ 0.9
CPSF6-205ENST00000550075 NCBP2LA6PVI3 153 aaKnown RBP20.65■□□□□ 0.9
CPSF6-205ENST00000550075 AMY1AP04745 511 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 AMY2AP04746 511 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 TFAP2AP05549 437 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 CTXN2P0C2S0 81 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 GPR12P47775 334 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 TMEM95Q3KNT9 176 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 Q6ZS46 218 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 ACOT12Q8WYK0 555 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 AGMATQ9BSE5 352 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 ST6GALNAC5Q9BVH7 336 aa20.65■□□□□ 0.9
CPSF6-205ENST00000550075 ZNF736B4DX44 427 aaPredicted RBP20.64■□□□□ 0.89
CPSF6-205ENST00000550075 PRR31Q5SQ13 230 aa20.64■□□□□ 0.89
CPSF6-205ENST00000550075 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.64■□□□□ 0.89
CPSF6-205ENST00000550075 WNT10AQ9GZT5 417 aa20.64■□□□□ 0.89
CPSF6-205ENST00000550075 NAA50Q9GZZ1 169 aaKnown RBP20.64■□□□□ 0.89
CPSF6-205ENST00000550075 FBN3Q75N90 2809 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 OR5H14A6NHG9 310 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 RORCP51449 518 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 CTF1Q16619 201 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 RPL39P5Q59GN2 51 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 ZNF251Q9BRH9 671 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 AUNIPQ9H7T9 357 aa20.63■□□□□ 0.89
CPSF6-205ENST00000550075 LIN7CQ9NUP9 197 aaKnown RBP20.63■□□□□ 0.89
CPSF6-205ENST00000550075 RBM7Q9Y580 266 aaKnown RBP20.63■□□□□ 0.89
CPSF6-205ENST00000550075 TET2Q6N021 2002 aaPredicted RBP20.63■□□□□ 0.89
CPSF6-205ENST00000550075 SH2D7A6NKC9 451 aaPredicted RBP20.62■□□□□ 0.89
CPSF6-205ENST00000550075 XRCC3O43542 346 aa20.62■□□□□ 0.89
CPSF6-205ENST00000550075 FBXO24O75426 580 aa20.62■□□□□ 0.89
CPSF6-205ENST00000550075 AP3S1Q92572 193 aa20.62■□□□□ 0.89
CPSF6-205ENST00000550075 RASL11BQ9BPW5 248 aa20.62■□□□□ 0.89
CPSF6-205ENST00000550075 RNF150Q9ULK6 438 aa20.62■□□□□ 0.89
CPSF6-205ENST00000550075 SSX5O60225 188 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 MC5RP33032 325 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 CBX5P45973 191 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 MMDQ15546 238 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 C2orf68Q2NKX9 166 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 TMEM69Q5SWH9 247 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 CNIH2Q6PI25 160 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 OR2D2Q9H210 308 aa20.61■□□□□ 0.89
CPSF6-205ENST00000550075 IGKV1D-8A0A087WSZ0 117 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 OR8U9P0C7N5 309 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 MZT2AQ6P582 158 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 FAM131AQ6UXB0 335 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 SLC35E3Q7Z769 313 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 H1FOOQ8IZA3 346 aaPredicted RBP20.6■□□□□ 0.89
CPSF6-205ENST00000550075 OR8U1Q8NH10 309 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 CMTM3Q96MX0 182 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 COMMD3Q9UBI1 195 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 ANXA10Q9UJ72 324 aa20.6■□□□□ 0.89
CPSF6-205ENST00000550075 KCNAB3O43448 404 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 APOA1P02647 267 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 ARPC4P59998 168 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 ACTBP60709 375 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 CENPVQ7Z7K6 275 aaPredicted RBP20.59■□□□□ 0.89
CPSF6-205ENST00000550075 FOXRED2Q8IWF2 684 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 C11orf44Q8N8P7 122 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 Q8N9W7 124 aa20.59■□□□□ 0.89
CPSF6-205ENST00000550075 WASHC3Q9Y3C0 194 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms