RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 HES5Q5TA89 166 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 C22orf42Q6IC83 251 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 PYHIN1Q6K0P9 492 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 LYPD6Q86Y78 171 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 TCTEX1D1Q8N7M0 179 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 C5orf56Q8N8D9 126 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 TSPAN14Q8NG11 270 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 CT45A3Q8NHU0 189 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 RCC1LQ96I51 464 aaKnown RBP4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 EAF1Q96JC9 268 aaPredicted RBP4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 TSNAXQ99598 290 aaKnown RBP4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 SULT4A1Q9BR01 284 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 PECRQ9BY49 303 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 WNT10AQ9GZT5 417 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 LPAR5Q9H1C0 372 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 ABCG5Q9H222 651 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 SERTAD4Q9NUC0 356 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 AK3Q9UIJ7 227 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 ZNF580Q9UK33 172 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 SIGLEC9Q9Y336 463 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 PRELID3BQ9Y3B1 194 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 WASHC3Q9Y3C0 194 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 ETV7Q9Y603 341 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 A0A075B6Q4 140 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 LOC100506127A0A0U1RQW1 187 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM272A0A1B0GTI8 110 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ARPC1BO15143 372 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 BET1O15155 118 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 SOCS1O15524 211 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 FABP7O15540 132 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 SPDEFO95238 335 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 TFAP2AP05549 437 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 CD28P10747 220 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 HIST1H1DP16402 221 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 CD36P16671 472 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 PAX6P26367 422 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 S100GP29377 79 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 LGALS7P47929 136 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 REG1BP48304 166 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ACTBP60709 375 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 RPS16P62249 146 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 QRFPP83859 136 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 CD83Q01151 205 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 LSAMPQ13449 338 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 FOXE3Q13461 319 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 INSL4Q14641 139 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 NEDD8Q15843 81 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 CDNFQ49AH0 187 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF660Q6AZW8 331 aaPredicted RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF880Q6PDB4 577 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 BAIAP2L2Q6UXY1 529 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 PDPNQ86YL7 162 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 STPG2Q8N412 459 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 OR52L2PQ8NGH6 319 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 C15orf40Q8WUR7 153 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 SGCDQ92629 289 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 FLYWCH2Q96CP2 140 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 S100A16Q96FQ6 103 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ARHGAP5-AS1Q96IT6 56 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 CITED2Q99967 270 aaPredicted RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 NICN1Q9BSH3 213 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 Q9N2K0 584 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 TXNL4BQ9NX01 149 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF107Q9UII5 783 aaPredicted RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 DAPK2Q9UIK4 370 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 GAB2Q9UQC2 676 aa4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 MRPS7Q9Y2R9 242 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-215ENST00000544584 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 IGHV3-72A0A0B4J1Y9 119 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 AIREO43918 545 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 ACTL6BO94805 426 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 CNIH1O95406 144 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 HLA-DRB1P01911 266 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 IGF1P05019 195 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 SAA2P0DJI9 122 aaPredicted RBP4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 GNB3P16520 340 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 SDC2P34741 201 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 MYCNOSP40205 109 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF134P52741 427 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 CLDN12P56749 244 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 SRSF4Q08170 494 aaKnown RBP4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 VMA21Q3ZAQ7 101 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 FAM209BQ5JX69 171 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 LDLRAD2Q5SZI1 272 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 IDNKQ5T6J7 187 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 HACD4Q5VWC8 232 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 SFXN4Q6P4A7 337 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 MZT2AQ6P582 158 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 CNIH2Q6PI25 160 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 Q6ZS49 121 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF833PQ6ZTB9 187 aa4.45□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF695Q8IW36 515 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms