RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CTSZQ9UBR2 303 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 LINC00312Q9Y6C7 94 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 CFAP46Q8IYW2 2715 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 ARID1AO14497 2285 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 PIGBOS1A0A0B4J2F0 54 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 B8ZZF3 427 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 LYNX1G3V0Z9 82 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 NDUFB3O43676 98 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
COPS7A-218ENST00000543939 LYNX1P0DP58 116 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF585BQ52M93 769 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 OR4D5Q8NGN0 318 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 RRNAD1Q96FB5 475 aaKnown RBP16.39■□□□□ 0.21
COPS7A-218ENST00000543939 ABHD14BQ96IU4 210 aa16.39■□□□□ 0.21
COPS7A-218ENST00000543939 SMG1Q96Q15 3661 aaKnown RBP16.38■□□□□ 0.21
COPS7A-218ENST00000543939 YLPM1P49750 1951 aaKnown RBP16.38■□□□□ 0.21
COPS7A-218ENST00000543939 CLEC18AA5D8T8 446 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 RP2O75695 350 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 CFDP00746 253 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-218ENST00000543939 IGKV1-39P01597 117 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 IGKV1D-39P04432 117 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF16P17020 682 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-218ENST00000543939 LRRC10Q5BKY1 277 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 CLEC18CQ8NCF0 446 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 SPIN2AQ99865 258 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 SPIN2BQ9BPZ2 258 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 C19orf12Q9NSK7 152 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 SDHAF2Q9NX18 166 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 TAS2R3Q9NYW6 316 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 IDI2-AS1Q9NZ38 188 aa16.38■□□□□ 0.21
COPS7A-218ENST00000543939 USF3Q68DE3 2245 aa16.37■□□□□ 0.21
COPS7A-218ENST00000543939 KCNAB3O43448 404 aa16.37■□□□□ 0.21
COPS7A-218ENST00000543939 DEDDO75618 318 aa16.37■□□□□ 0.21
COPS7A-218ENST00000543939 RPL30P62888 115 aaKnown RBP16.37■□□□□ 0.21
COPS7A-218ENST00000543939 RPL31P62899 125 aaKnown RBP16.37■□□□□ 0.21
COPS7A-218ENST00000543939 TMEM30BQ3MIR4 351 aa16.37■□□□□ 0.21
COPS7A-218ENST00000543939 FOXRED2Q8IWF2 684 aa16.37■□□□□ 0.21
COPS7A-218ENST00000543939 K7EPK0 472 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 DVL1O14640 695 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 SCGB1D2O95969 90 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 PRB1P04280 392 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF134P52741 427 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF273Q14593 569 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 UTF1Q5T230 341 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF66Q6ZN08 573 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 FAM71E2Q8N5Q1 922 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 ZFP57Q9NU63 452 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 LSM5Q9Y4Y9 91 aaKnown RBP16.36■□□□□ 0.21
COPS7A-218ENST00000543939 BCL2L11O43521 198 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 IGHV2-70P01814 119 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 RLN2P04090 185 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 CATR1Q13166 79 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 EXOSC2Q13868 293 aaKnown RBP16.36■□□□□ 0.21
COPS7A-218ENST00000543939 SMCO1Q147U7 214 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 Q3ZCU0 254 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 BTNL3Q6UXE8 466 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 AQP10Q96PS8 301 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 IFI27L2Q9H2X8 130 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 LPAR3Q9UBY5 353 aa16.36■□□□□ 0.21
COPS7A-218ENST00000543939 HRNRQ86YZ3 2850 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 MSGN1A6NI15 193 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 ATP6V1G1O75348 118 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 PROP1O75360 226 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 IFNA7P01567 189 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 GPR12P47775 334 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 MRPS11P82912 194 aaKnown RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 NDUFA5Q16718 116 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 SLC51BQ86UW2 128 aa16.35■□□□□ 0.21
COPS7A-218ENST00000543939 NEU4Q8WWR8 484 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 LSM10Q969L4 123 aaKnown RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 HSD17B10Q99714 261 aaKnown RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 FAM212BQ9NTI7 297 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-218ENST00000543939 A0A0G2JRQ6 117 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 KANTRA0A1W2PQU2 76 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 SLC31A2O15432 143 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 ST8SIA3O43173 380 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 MMP23AO75900 390 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 CLDN1O95832 211 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 IGHV3-7P01780 117 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 SLC25A6P12236 298 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 NUP62P37198 522 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-218ENST00000543939 RAB7AP51149 207 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 THOC7Q6I9Y2 204 aaKnown RBP16.34■□□□□ 0.21
COPS7A-218ENST00000543939 TCTEX1D1Q8N7M0 179 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 ZNF439Q8NDP4 499 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 OR10A7Q8NGE5 316 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 GPR146Q96CH1 333 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 GAL3ST2Q9H3Q3 398 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 RPUSD1Q9UJJ7 312 aaKnown RBP16.34■□□□□ 0.21
COPS7A-218ENST00000543939 GAB2Q9UQC2 676 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 POMT1Q9Y6A1 747 aa16.34■□□□□ 0.21
COPS7A-218ENST00000543939 A6NNC1 897 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 LPAR6P43657 344 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 BRWD1-AS2P59051 145 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 CT45A1Q5HYN5 189 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 PRAMEF5Q5TYX0 476 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 CT45A3Q8NHU0 189 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms