RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 HSPA12AO43301 675 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 IGHV3-11P01762 117 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 MYL12AP19105 171 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 FSTP19883 344 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 CX3CL1P78423 397 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 NDPQ00604 133 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 MED21Q13503 144 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 YIF1BQ5BJH7 314 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 FAM71F2Q6NXP2 309 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 FAM131AQ6UXB0 335 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 ANKRD13BQ86YJ7 626 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 CDH26Q8IXH8 852 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 APH1BQ8WW43 257 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 ABRACLQ9P1F3 81 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 STEAP1Q9UHE8 339 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
RTN3-211ENST00000542238 PDCD6O75340 191 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
RTN3-211ENST00000542238 TPPP2P59282 170 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 PPP1R27Q86WC6 154 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 MRPL30Q8TCC3 161 aaKnown RBP11.87□□□□□ -0.51
RTN3-211ENST00000542238 Q96M66 194 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 RSRP1Q9BUV0 290 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 Q9H521 79 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 SLA2Q9H6Q3 261 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 PIPOXQ9P0Z9 390 aa11.87□□□□□ -0.51
RTN3-211ENST00000542238 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
RTN3-211ENST00000542238 A0A1W2PPK0 400 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 OR5H14A6NHG9 310 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 A8MZ25 164 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 H7C2Y5 167 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 RAB29O14966 203 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 MC5RP33032 325 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 CAPGP40121 348 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 HSPA13P48723 471 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 AQP4P55087 323 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 SMN1Q16637 294 aaKnown RBP11.86□□□□□ -0.51
RTN3-211ENST00000542238 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 DMKNQ6E0U4 476 aaPredicted RBP11.86□□□□□ -0.51
RTN3-211ENST00000542238 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 Q8N1Y9 231 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 IL1F10Q8WWZ1 152 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 OR14A2Q96R54 314 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 RAB26Q9ULW5 256 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 CSMD3Q7Z407 3707 aa11.86□□□□□ -0.51
RTN3-211ENST00000542238 TNCP24821 2201 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 TRBV5-7A0A0A0MS05 114 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 FCN1O00602 326 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 RBBP9O75884 186 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 LALBAP00709 142 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 IGLV1-51P01701 117 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
RTN3-211ENST00000542238 VEGFCP49767 419 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 RPS11P62280 158 aaKnown RBP eCLIP11.85□□□□□ -0.51
RTN3-211ENST00000542238 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 TTC23Q5W5X9 447 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 HAPLN4Q86UW8 402 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 ZNF555Q8NEP9 628 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 LFNGQ8NES3 379 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 RHOVQ96L33 236 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 NEDD4LQ96PU5 975 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 LYSTQ99698 3801 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 VCX3AQ9NNX9 186 aa11.85□□□□□ -0.51
RTN3-211ENST00000542238 CNOT2Q9NZN8 540 aaKnown RBP11.85□□□□□ -0.51
RTN3-211ENST00000542238 DIMT1Q9UNQ2 313 aaKnown RBP11.85□□□□□ -0.51
RTN3-211ENST00000542238 EPPK1P58107 5090 aaKnown RBP11.84□□□□□ -0.51
RTN3-211ENST00000542238 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
RTN3-211ENST00000542238 TRGV3P03979 118 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 IFNA6P05013 189 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 TFAP2AP05549 437 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 ARSBP15848 533 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 ZP3P21754 424 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 HMGN3Q15651 99 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 RPL39P5Q59GN2 51 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 NKAIN3Q8N8D7 197 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 ZFP41Q8N8Y5 198 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 CLCC1Q96S66 551 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 RNF5Q99942 180 aa11.84□□□□□ -0.51
RTN3-211ENST00000542238 UQCC2Q9BRT2 126 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms