RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OR8H1Q8NGG4 311 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF251Q9BRH9 671 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 PARP12Q9H0J9 701 aaKnown RBP11.76□□□□□ -0.53
RAB40B-202ENST00000538809 KCNK7Q9Y2U2 307 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 RAB3BP20337 219 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 HOXD3P31249 432 aaPredicted RBP11.75□□□□□ -0.53
RAB40B-202ENST00000538809 FGF9P31371 208 aaPredicted RBP11.75□□□□□ -0.53
RAB40B-202ENST00000538809 SOX6P35712 828 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 RANBP1P43487 201 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 MOGAT2Q3SYC2 334 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 C22orf42Q6IC83 251 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 COMMD1Q8N668 190 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 FCGR1BQ92637 280 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 RITA1Q96K30 269 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 Q9N2K0 584 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 C12orf4Q9NQ89 552 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF107Q9UII5 783 aaPredicted RBP11.75□□□□□ -0.53
RAB40B-202ENST00000538809 RAB22AQ9UL26 194 aa11.75□□□□□ -0.53
RAB40B-202ENST00000538809 RAB27BO00194 218 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 RRP9O43818 475 aaKnown RBP11.74□□□□□ -0.53
RAB40B-202ENST00000538809 MYL9P24844 172 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 PSMB9P28065 219 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 ACTBP60709 375 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 RPL39P5Q59GN2 51 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF773Q6PK81 442 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 FAM131AQ6UXB0 335 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF695Q8IW36 515 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 TXNL4BQ9NX01 149 aaKnown RBP11.74□□□□□ -0.53
RAB40B-202ENST00000538809 OR1A1Q9P1Q5 309 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 SLC23A1Q9UHI7 598 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 MGAT4AQ9UM21 535 aa11.74□□□□□ -0.53
RAB40B-202ENST00000538809 A0A0B4J203 849 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 SCTP09683 121 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 RAB6AP20340 208 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 VDAC1P21796 283 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 RAB25P57735 213 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 KRTAP10-11P60412 298 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 CFHR3Q02985 330 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
RAB40B-202ENST00000538809 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
RAB40B-202ENST00000538809 PTX4Q96A99 478 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 ABHD14BQ96IU4 210 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 P2RX4Q99571 388 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 CMSS1Q9BQ75 279 aaKnown RBP11.73□□□□□ -0.53
RAB40B-202ENST00000538809 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
RAB40B-202ENST00000538809 K7EIL1 84 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 MFNGO00587 321 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 NBR2O15453 112 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 DUS4LO95620 317 aaKnown RBP11.72□□□□□ -0.53
RAB40B-202ENST00000538809 MYCNOSP40205 109 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 FOXE3Q13461 319 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 OR10R2Q8NGX6 335 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 KCTD7Q96MP8 289 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 TOLLIPQ9H0E2 274 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 PIPOXQ9P0Z9 390 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF580Q9UK33 172 aa11.72□□□□□ -0.53
RAB40B-202ENST00000538809 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
RAB40B-202ENST00000538809 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 G3V318 75 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 CCL24O00175 119 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 RAB29O14966 203 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 HSPA12AO43301 675 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 PROP1O75360 226 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 IGHG4P01861 327 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 CT45A6P0DMU7 189 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 CT45A5P0DMU8 189 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 CT45A7P0DMV0 189 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 SLC6A1P30531 599 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 KCTD21Q4G0X4 260 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 RAB3CQ96E17 227 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 C11orf54Q9H0W9 315 aaPredicted RBP11.71□□□□□ -0.53
RAB40B-202ENST00000538809 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.53
RAB40B-202ENST00000538809 IGHV7-81A0A0B4J1V7 117 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 SMIM30A4D0T7 59 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 NOTOA8MTQ0 251 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 NDUFA3O95167 84 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 HLA-DRB1P01911 266 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 IGF1P05019 195 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 ELANEP08246 267 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 FCGR3AP08637 254 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 HIST1H1DP16402 221 aaKnown RBP11.7□□□□□ -0.54
RAB40B-202ENST00000538809 ZBTB25P24278 435 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 CEACAM6P40199 344 aa11.7□□□□□ -0.54
RAB40B-202ENST00000538809 NDPQ00604 133 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms