RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SMIM31A0A1B0GVY4 71 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 M0QZ24 198 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 SAA2P0DJI9 122 aaPredicted RBP17.47■□□□□ 0.39
SSPN-204ENST00000535504 GPR12P47775 334 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 BLCAPP62952 87 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 HERPUD1Q15011 391 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 MZT2AQ6P582 158 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 C5orf24Q7Z6I8 188 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 SAMD12Q8N8I0 201 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 ACOT12Q8WYK0 555 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 RDH8Q9NYR8 311 aa17.47■□□□□ 0.39
SSPN-204ENST00000535504 ZNF230Q9UIE0 474 aaPredicted RBP17.47■□□□□ 0.39
SSPN-204ENST00000535504 GABARAPO95166 117 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 GSTT2P0CG29 244 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 GSTT2BP0CG30 244 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 ZNF260Q3ZCT1 412 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 Q6ZPA2 131 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 Q6ZS49 121 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 ZNF833PQ6ZTB9 187 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 NUDCD2Q8WVJ2 157 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 MAFIPQ8WZ33 124 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 EAF1Q96JC9 268 aaPredicted RBP17.46■□□□□ 0.39
SSPN-204ENST00000535504 CITED1Q99966 193 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 RASL11BQ9BPW5 248 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 CABLES2Q9BTV7 478 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 IFI27L2Q9H2X8 130 aa17.46■□□□□ 0.39
SSPN-204ENST00000535504 CBX5P45973 191 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 LSAMPQ13449 338 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 EBI3Q14213 229 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 TMEM69Q5SWH9 247 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 SLC25A38Q96DW6 304 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 MRPL20Q9BYC9 149 aaKnown RBP17.45■□□□□ 0.38
SSPN-204ENST00000535504 C11orf54Q9H0W9 315 aaPredicted RBP17.45■□□□□ 0.38
SSPN-204ENST00000535504 ABCG5Q9H222 651 aa17.45■□□□□ 0.38
SSPN-204ENST00000535504 MC5RP33032 325 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 SOX6P35712 828 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 OR3A3P47888 321 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 ARPC4P59998 168 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.44■□□□□ 0.38
SSPN-204ENST00000535504 ABHD14BQ96IU4 210 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 ZNF251Q9BRH9 671 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 COMMD3Q9UBI1 195 aa17.44■□□□□ 0.38
SSPN-204ENST00000535504 TRBV6-7A0A0A0MS04 114 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 OR5H14A6NHG9 310 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 XRCC3O43542 346 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 FBXO24O75426 580 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 ALDH3B2P48448 385 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 CBX3Q13185 183 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 IGSF11Q5DX21 431 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 CENPVQ7Z7K6 275 aaPredicted RBP17.43■□□□□ 0.38
SSPN-204ENST00000535504 FOXRED2Q8IWF2 684 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 ODF3L1Q8IXM7 274 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 C5orf56Q8N8D9 126 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 CMTM3Q96MX0 182 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 IFT46Q9NQC8 304 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 KIAA1456Q9P272 454 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 SCOCQ9UIL1 159 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 DNHD1Q96M86 4753 aa17.43■□□□□ 0.38
SSPN-204ENST00000535504 H7C2Y5 167 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 APOA2P02652 100 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 RPL5P46777 297 aaKnown RBP17.42■□□□□ 0.38
SSPN-204ENST00000535504 MMDQ15546 238 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 C2orf68Q2NKX9 166 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 CNIH2Q6PI25 160 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 CLVS1Q8IUQ0 354 aaPredicted RBP17.42■□□□□ 0.38
SSPN-204ENST00000535504 RAB2BQ8WUD1 216 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 NABP2Q9BQ15 211 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 OR2D2Q9H210 308 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 AUNIPQ9H7T9 357 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 SERTAD4Q9NUC0 356 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 LIN7CQ9NUP9 197 aaKnown RBP17.42■□□□□ 0.38
SSPN-204ENST00000535504 ELF5Q9UKW6 265 aaPredicted RBP17.42■□□□□ 0.38
SSPN-204ENST00000535504 RNF150Q9ULK6 438 aa17.42■□□□□ 0.38
SSPN-204ENST00000535504 TENM1Q9UKZ4 2725 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 IGKV1-6A0A0C4DH72 117 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 KCNAB3O43448 404 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 TFAP2AP05549 437 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 SRSF4Q08170 494 aaKnown RBP17.41■□□□□ 0.38
SSPN-204ENST00000535504 RPL39P5Q59GN2 51 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 SLC35E3Q7Z769 313 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 TOLLIPQ9H0E2 274 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 ANXA10Q9UJ72 324 aa17.41■□□□□ 0.38
SSPN-204ENST00000535504 RBBP9O75884 186 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 APOA1P02647 267 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 OR8U9P0C7N5 309 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 ZNF182P17025 639 aaPredicted RBP17.4■□□□□ 0.38
SSPN-204ENST00000535504 CTF1Q16619 201 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 BEST4Q8NFU0 473 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 OR4X2Q8NGF9 303 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 OR8U1Q8NH10 309 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 AGMATQ9BSE5 352 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 NAA50Q9GZZ1 169 aaKnown RBP17.4■□□□□ 0.38
SSPN-204ENST00000535504 PARP12Q9H0J9 701 aaKnown RBP17.4■□□□□ 0.38
SSPN-204ENST00000535504 WASHC3Q9Y3C0 194 aa17.4■□□□□ 0.38
SSPN-204ENST00000535504 FAM25AB3EWG3 89 aa17.39■□□□□ 0.37
SSPN-204ENST00000535504 FAM25CB3EWG5 89 aa17.39■□□□□ 0.37
SSPN-204ENST00000535504 FAM25GB3EWG6 89 aa17.39■□□□□ 0.37
SSPN-204ENST00000535504 ZNF736B4DX44 427 aaPredicted RBP17.39■□□□□ 0.37
SSPN-204ENST00000535504 SLC22A5O76082 557 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms