RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 HACD4Q5VWC8 232 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 CROCCP3Q8IVE0 287 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 Q8N9W7 124 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 OR8H1Q8NGG4 311 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 EDARADDQ8WWZ3 215 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 PIPOXQ9P0Z9 390 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
PKP3-211ENST00000534401 SPATA2Q9UM82 520 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 TRBV6-7A0A0A0MS04 114 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 A0A0A6YYH2 397 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 A6NJ64 397 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 M0QZ24 198 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 RAB29O14966 203 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 ST8SIA5O15466 376 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 FABP7O15540 132 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 SERPINB10P48595 397 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 TREML4Q6UXN2 200 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 FUNDC2Q9BWH2 189 aa16.93■□□□□ 0.3
PKP3-211ENST00000534401 MRPL20Q9BYC9 149 aaKnown RBP16.93■□□□□ 0.3
PKP3-211ENST00000534401 SH2D7A6NKC9 451 aaPredicted RBP16.92■□□□□ 0.3
PKP3-211ENST00000534401 IGHG2P01859 326 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 GSTT2P0CG29 244 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 GSTT2BP0CG30 244 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 MRPS15P82914 257 aaKnown RBP16.92■□□□□ 0.3
PKP3-211ENST00000534401 PNLIPRP3Q17RR3 467 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 IDNKQ5T6J7 187 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 DCSTAMPQ9H295 470 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 GAB2Q9UQC2 676 aa16.92■□□□□ 0.3
PKP3-211ENST00000534401 IGKV1D-8A0A087WSZ0 117 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 PITPNAQ00169 270 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 CD83Q01151 205 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 IGSF11Q5DX21 431 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 FAM71E2Q8N5Q1 922 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 ABCG5Q9H222 651 aa16.91■□□□□ 0.3
PKP3-211ENST00000534401 LIN7CQ9NUP9 197 aaKnown RBP16.91■□□□□ 0.3
PKP3-211ENST00000534401 ZNF230Q9UIE0 474 aaPredicted RBP16.91■□□□□ 0.3
PKP3-211ENST00000534401 A0A075B6Q4 140 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 ADARB2-AS1A8MUL3 147 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 HSPA12AO43301 675 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 SSX5O60225 188 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 CT45A6P0DMU7 189 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 CT45A5P0DMU8 189 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 CT45A7P0DMV0 189 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 CD28P10747 220 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 ARFRP1Q13795 201 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 ABHD14BQ96IU4 210 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 S1PR3Q99500 378 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 RDH8Q9NYR8 311 aa16.9■□□□□ 0.3
PKP3-211ENST00000534401 FBXO24O75426 580 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 ALDH3B2P48448 385 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 F2RL1P55085 397 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 LSM3P62310 102 aaKnown RBP16.89■□□□□ 0.29
PKP3-211ENST00000534401 C2orf68Q2NKX9 166 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 RPL39P5Q59GN2 51 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 TCTEX1D4Q5JR98 221 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 ANKRD13BQ86YJ7 626 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.89■□□□□ 0.29
PKP3-211ENST00000534401 OR5AN1Q8NGI8 311 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 SLC25A46Q96AG3 418 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 MMP27Q9H306 513 aa16.89■□□□□ 0.29
PKP3-211ENST00000534401 TMEM235A6NFC5 223 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 TSPAN15O95858 294 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 TFAP2AP05549 437 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 TALDO1P37837 337 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 OR5AU1Q8NGC0 362 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 MAFIPQ8WZ33 124 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 KCTD12Q96CX2 325 aaKnown RBP16.88■□□□□ 0.29
PKP3-211ENST00000534401 RBMXL1Q96E39 390 aaKnown RBP16.88■□□□□ 0.29
PKP3-211ENST00000534401 RITA1Q96K30 269 aa16.88■□□□□ 0.29
PKP3-211ENST00000534401 PLXNB1O43157 2135 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 NCS1P62166 190 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 CTF1Q16619 201 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 ARSJQ5FYB0 599 aaPredicted RBP16.87■□□□□ 0.29
PKP3-211ENST00000534401 NDUFA11Q86Y39 141 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 H1FOOQ8IZA3 346 aaPredicted RBP16.87■□□□□ 0.29
PKP3-211ENST00000534401 C11orf44Q8N8P7 122 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 NPBQ8NG41 125 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 OR10J5Q8NHC4 309 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 NUDCD2Q8WVJ2 157 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 PHF21AQ96BD5 680 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
PKP3-211ENST00000534401 ZNF580Q9UK33 172 aa16.87■□□□□ 0.29
PKP3-211ENST00000534401 NOTCH1P46531 2555 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 OR5H14A6NHG9 310 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 LINC01548A6NM66 108 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 NCBP2LA6PVI3 153 aaKnown RBP16.86■□□□□ 0.29
PKP3-211ENST00000534401 H0YJW9 148 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 GABARAPO95166 117 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 NDUFA3O95167 84 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 MC5RP33032 325 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 GPR12P47775 334 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 ACTBP60709 375 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 C9orf152Q5JTZ5 239 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 HIST2H2BDQ6DRA6 164 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 CENPVQ7Z7K6 275 aaPredicted RBP16.86■□□□□ 0.29
PKP3-211ENST00000534401 CITED2Q99967 270 aaPredicted RBP16.86■□□□□ 0.29
PKP3-211ENST00000534401 AUNIPQ9H7T9 357 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 DIABLOQ9NR28 239 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 RNF150Q9ULK6 438 aa16.86■□□□□ 0.29
PKP3-211ENST00000534401 TRAV18A0A075B6X5 111 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms