RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 TMEM272A0A1B0GTI8 110 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 DUXBA0A1W2PPF3 345 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RFPL4AA6NLU0 287 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RFPL4AL1F8VTS6 287 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RPP14O95059 124 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 CD74P04233 296 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 GAPDHP04406 335 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 IL6RP08887 468 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 TMEM225BP0DP42 221 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SLC2A1P11166 492 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 ARSBP15848 533 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HIST1H1DP16402 221 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 ANOS1P23352 680 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TAGLN2P37802 199 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 LGALS7P47929 136 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RORCP51449 518 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TAS2R46P59540 309 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SCN1BQ07699 218 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TPTE2P1Q5T6R2 138 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PVRIGQ6DKI7 326 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SFRP4Q6FHJ7 346 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 SIGIRRQ6IA17 410 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SFXN4Q6P4A7 337 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR10AD1Q8NGE0 317 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR4F5Q8NH21 305 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SETD6Q8TBK2 473 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 ZFAND1Q8TCF1 268 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MYOZ3Q8TDC0 251 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CD300LFQ8TDQ1 290 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TMEM190Q8WZ59 177 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 IL22RA2Q969J5 263 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 DNAJA3Q96EY1 480 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SAT2Q96F10 170 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 CNBD2Q96M20 576 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PDCD1LG2Q9BQ51 273 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PECRQ9BY49 303 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 C7orf69Q9H7B7 122 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 DIABLOQ9NR28 239 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CALYQ9NYX4 217 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 C1RLQ9NZP8 487 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 COMMD9Q9P000 198 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HSPB7Q9UBY9 170 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 VPREB3Q9UKI3 123 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MED12Q93074 2177 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 MUC4Q99102 2169 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 MEIKINA0A087WXM9 373 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 IGHV2-26A0A0B4J1V2 119 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 NAP1L6A6NFF2 107 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 J3QR06 171 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 NDUFS7O75251 213 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TGFAP01135 160 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 HLA-DQB1P01920 261 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 GYPAP02724 150 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SFTPBP07988 381 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 RPA2P15927 270 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 CD36P16671 472 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 RPS27P42677 84 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 RAB13P51153 203 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 CD83Q01151 205 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 UNC119Q13432 240 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SSX2Q16385 188 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 CTF1Q16619 201 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 PAN3Q58A45 887 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 ASPHD1Q5U4P2 390 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 CST9LP1Q5W188 147 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 ZNF660Q6AZW8 331 aaPredicted RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 AWAT2Q6E213 333 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 LYPD2Q6UXB3 125 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 VMO1Q7Z5L0 202 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 GPR141Q7Z602 305 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 COMMD2Q86X83 199 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 PDPNQ86YL7 162 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TGIF2LXQ8IUE1 241 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 H1FOOQ8IZA3 346 aaPredicted RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 ARRDC1Q8N5I2 433 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 ZDHHC22Q8N966 263 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 OR4P4Q8NGL7 312 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 OR10AC1Q8NH08 325 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 RBM14Q96PK6 669 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 SCGB3A2Q96PL1 93 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 RBM38Q9H0Z9 239 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 ZFP57Q9NU63 452 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 LIN7CQ9NUP9 197 aaKnown RBP2.28□□□□□ -2.04
MCF2-208ENST00000519895 UFSP2Q9NUQ7 469 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TMEM140Q9NV12 185 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TCF19Q9Y242 345 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 FAM230AA0A1W2PPH8 454 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 BTBD17A6NE02 478 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 BUB1B-PAK6H3BSN5 160 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 M0R129 80 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 AIREO43918 545 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 IGF1P05019 195 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 TFAP2AP05549 437 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A6P12236 298 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 HTR1DP28221 377 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 IL2RGP31785 369 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SDC2P34741 201 aa2.28□□□□□ -2.04
MCF2-208ENST00000519895 SOX6P35712 828 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms