RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 RANGRFQ9HD47 186 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 TMEM138Q9NPI0 162 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 PAK1IP1Q9NWT1 392 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 IL36GQ9NZH8 169 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 ING4Q9UNL4 249 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 ST3GAL6Q9Y274 331 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 ERGIC3Q9Y282 383 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 NUBP2Q9Y5Y2 271 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
CTNNA1-215ENST00000519309 IGHV3-43A0A0B4J1X8 118 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 GPX5O75715 221 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CD2P06729 351 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 IGHV3-43DP0DP04 118 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 FSTP19883 344 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 SERPINA2P20848 420 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 MECP2P51608 486 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 ZNF134P52741 427 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CD81P60033 236 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CX3CL1P78423 397 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 RIPK1Q13546 671 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 Q499Y3 187 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 SLC22A6Q4U2R8 563 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 AKIRIN2Q53H80 203 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 ACTBL2Q562R1 376 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CT45A1Q5HYN5 189 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 LIN54Q6MZP7 749 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 C8orf59Q8N0T1 100 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CT45A3Q8NHU0 189 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 MUL1Q969V5 352 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CPNE2Q96FN4 548 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 RITA1Q96K30 269 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 DERL3Q96Q80 235 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 MYCBPQ99417 103 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 MRPL20Q9BYC9 149 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 RAB9BQ9NP90 201 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 PLCXD1Q9NUJ7 323 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 CNOT2Q9NZN8 540 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 RNF150Q9ULK6 438 aa6.35□□□□□ -1.39
CTNNA1-215ENST00000519309 IRGMA1A4Y4 181 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 IZUMO1RA6ND01 250 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CXorf65A6NEN9 183 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 EFCAB10A6NFE3 127 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 H3BUA1 57 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 MAGEB3O15480 346 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 DEDDO75618 318 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 OR7C1O76099 320 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 TPPPO94811 219 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 OR2A4O95047 310 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CSTBP04080 98 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 MAS1P04201 325 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 TFAP2AP05549 437 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CSN3P07498 182 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 ATF4P18848 351 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CELP19835 753 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 AQP4P55087 323 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 WNT4P56705 351 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 PPP3R1P63098 170 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 TMEM267Q0VDI3 215 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 PMS2P11Q13670 270 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 YIF1BQ5BJH7 314 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 SIGIRRQ6IA17 410 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 ZNF497Q6ZNH5 498 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 LINC00596Q86U02 117 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 ODF3L1Q8IXM7 274 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 GAPTQ8N292 157 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 NANOGP1Q8N7R0 232 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 NEURL2Q9BR09 285 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 METTL9Q9H1A3 318 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 KCNK15Q9H427 330 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 BANF2Q9H503 90 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 C8orf4Q9NR00 106 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 ETAA1Q9NY74 926 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 RCC2Q9P258 522 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 GNG12Q9UBI6 72 aa6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 LSM2Q9Y333 95 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-215ENST00000519309 RRHO14718 337 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 CNIH1O95406 144 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 MT-ND4P03905 459 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 TRGV3P03979 118 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 CDK1P06493 297 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 SYNJ2BPP57105 145 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 TNFRSF9Q07011 255 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 MPV17LQ2QL34 196 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 FAM71F2Q6NXP2 309 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 TRAT1Q6PIZ9 186 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 GLIPR1L1Q6UWM5 242 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 ZNF833PQ6ZTB9 187 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 JAGN1Q8N5M9 183 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 ABHD14AQ9BUJ0 271 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 WFDC10AQ9H1F0 79 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 SRD5A3Q9H8P0 318 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 ZC4H2Q9NQZ6 224 aa6.33□□□□□ -1.4
CTNNA1-215ENST00000519309 SLC2A8Q9NY64 477 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms