RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	BANF2	Q9H503	90 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	RANGRF	Q9HD47	186 aa	Predicted RBP	12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	PIPOX	Q9P0Z9	390 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	LRRC42	Q9Y546	428 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	TRAV8-7	A0A075B6U6	113 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	TFAP2A	P05549	437 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	GSTP1	P09211	210 aa	Known RBP	12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	SIGIRR	Q6IA17	410 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	TMPRSS11A	Q6ZMR5	421 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	GTSCR1	Q86UQ5	136 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	SMIM19	Q96E16	107 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	RDH12	Q96NR8	316 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	IFI27L2	Q9H2X8	130 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	TUBA4B	Q9H853	241 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	STEAP1	Q9UHE8	339 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	GAB2	Q9UQC2	676 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	TNC	P24821	2201 aa		12.04	□□□□□ -0.48
LMNA-223	ENST00000515459	TRBV5-5	A0A0J9YX44	114 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	RAB29	O14966	203 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	OGG1	O15527	345 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	PDCD6	O75340	191 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	CRTAP	O75718	401 aa	Predicted RBP	12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	RBBP9	O75884	186 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	CT45A6	P0DMU7	189 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	CT45A5	P0DMU8	189 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	CT45A7	P0DMV0	189 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	MC5R	P33032	325 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	ETV1	P50549	477 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459		Q499Y3	187 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	OR2G6	Q5TZ20	316 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	ZNF562	Q6V9R5	426 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	PYDC1	Q8WXC3	89 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	CYYR1	Q96J86	154 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459		Q96M66	194 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	TMED9	Q9BVK6	235 aa		12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	FGF20	Q9NP95	211 aa	Predicted RBP	12.03	□□□□□ -0.48
LMNA-223	ENST00000515459	C13orf42	A0A1B0GVH6	325 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459		H7C2Y5	167 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	ST8SIA5	O15466	376 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	BAG2	O95816	211 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	FST	P19883	344 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	DCK	P27707	260 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	KLF5	Q13887	457 aa	Predicted RBP	12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	RPL39P5	Q59GN2	51 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	YIF1B	Q5BJH7	314 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	DMKN	Q6E0U4	476 aa	Predicted RBP	12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	CDH26	Q8IXH8	852 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	CBR4	Q8N4T8	237 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	OR9G4	Q8NGQ1	327 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	IL1F10	Q8WWZ1	152 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	GHSR	Q92847	366 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	OR14A2	Q96R54	314 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	CLCC1	Q96S66	551 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	RNF5	Q99942	180 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	ZNF355P	Q9NSJ1	428 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	BABAM2	Q9NXR7	383 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	ABRACL	Q9P1F3	81 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	METTL1	Q9UBP6	276 aa	Known RBP	12.02	□□□□□ -0.49
LMNA-223	ENST00000515459	WASHC3	Q9Y3C0	194 aa		12.02	□□□□□ -0.49
LMNA-223	ENST00000515459		H0YJW9	148 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	CIB2	O75838	187 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	CA2	P00918	260 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	HMGN3	Q15651	99 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	MOGAT2	Q3SYC2	334 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	C6orf141	Q5SZD1	244 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	LCN12	Q6JVE5	192 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	APH1B	Q8WW43	257 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	THAP7	Q9BT49	309 aa	Predicted RBP	12.01	□□□□□ -0.49
LMNA-223	ENST00000515459	SLC23A1	Q9UHI7	598 aa		12.01	□□□□□ -0.49
LMNA-223	ENST00000515459		A0A0G2JLM5	398 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	LOC100130705	A0A1B0GUX0	176 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459		A0A1W2PPK0	400 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	ANKRD34B	A5PLL1	514 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459		H3BUA1	57 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	SLC22A1	O15245	554 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	LALBA	P00709	142 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	CAPG	P40121	348 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	RPS11	P62280	158 aa	Known RBP eCLIP	12	□□□□□ -0.49
LMNA-223	ENST00000515459	IL34	Q6ZMJ4	242 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	POC5	Q8NA72	575 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	OR5AN1	Q8NGI8	311 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	FAM46B	Q96A09	425 aa		12	□□□□□ -0.49
LMNA-223	ENST00000515459	ATP5H	O75947	161 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	SYNJ2BP	P57105	145 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	FXYD3	Q14802	87 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	PSG5	Q15238	335 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	SMN1	Q16637	294 aa	Known RBP	11.99	□□□□□ -0.49
LMNA-223	ENST00000515459		Q8N402	240 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	GRPEL2	Q8TAA5	225 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	ABHD14B	Q96IU4	210 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	NEDD4L	Q96PU5	975 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	TSNAX	Q99598	290 aa	Known RBP	11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	SULT4A1	Q9BR01	284 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	HIPK2	Q9H2X6	1198 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	RETN	Q9HD89	108 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	CEPT1	Q9Y6K0	416 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	HYDIN	Q4G0P3	5121 aa		11.99	□□□□□ -0.49
LMNA-223	ENST00000515459	TRBV5-7	A0A0A0MS05	114 aa		11.98	□□□□□ -0.49
LMNA-223	ENST00000515459	SHISA3	A0PJX4	238 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms