RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CEACAM6P40199 344 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 C9orf152Q5JTZ5 239 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 CENPVQ7Z7K6 275 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-210ENST00000515420 CROCCP3Q8IVE0 287 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 FAM71E2Q8N5Q1 922 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 C11orf44Q8N8P7 122 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 Q8N9W7 124 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 OR4X2Q8NGF9 303 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 NABP2Q9BQ15 211 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 ATG5Q9H1Y0 275 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 ABCG5Q9H222 651 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 PLSCR3Q9NRY6 295 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 IGKV1-6A0A0C4DH72 117 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 SMIM30A4D0T7 59 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 OR5H14A6NHG9 310 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 NCBP2LA6PVI3 153 aaKnown RBP10.12□□□□□ -0.79
CLCN3-210ENST00000515420 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 FABP7O15540 132 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 KCNAB3O43448 404 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 GSTP1P09211 210 aaKnown RBP10.12□□□□□ -0.79
CLCN3-210ENST00000515420 PITPNAQ00169 270 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 FOXRED2Q8IWF2 684 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-210ENST00000515420 OR4F17Q8NGA8 305 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 LGALS14Q8TCE9 139 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 PHF21AQ96BD5 680 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 OR4F4Q96R69 305 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF251Q9BRH9 671 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 MRPL20Q9BYC9 149 aaKnown RBP10.12□□□□□ -0.79
CLCN3-210ENST00000515420 DCSTAMPQ9H295 470 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 RHBDL2Q9NX52 303 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 OR1A1Q9P1Q5 309 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF580Q9UK33 172 aa10.12□□□□□ -0.79
CLCN3-210ENST00000515420 TRBV6-7A0A0A0MS04 114 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 A0A0A6YYH2 397 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 A6NJ64 397 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF736B4DX44 427 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 AP4M1O00189 453 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 AIREO43918 545 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 SNRPBP14678 240 aaKnown RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 MC5RP33032 325 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 OR3A3P47888 321 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 MXD1Q05195 221 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 ARFRP1Q13795 201 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 HACD4Q5VWC8 232 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 OR10J5Q8NHC4 309 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 YIPF6Q96EC8 236 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 GON7Q9BXV9 100 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 PARP12Q9H0J9 701 aaKnown RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 C11orf54Q9H0W9 315 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 RNF167Q9H6Y7 350 aa10.11□□□□□ -0.79
CLCN3-210ENST00000515420 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-210ENST00000515420 A0A075B6Q4 140 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 RBBP9O75884 186 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 CLEC2LP0C7M8 214 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 SOX6P35712 828 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 TALDO1P37837 337 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 GPR12P47775 334 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 F2RL1P55085 397 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 ACTBP60709 375 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 SLC35B1P78383 322 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 MMDQ15546 238 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 PNLIPRP3Q17RR3 467 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 CDNFQ49AH0 187 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 STPG2Q8N412 459 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 NPBQ8NG41 125 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 OR5AN1Q8NGI8 311 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 FAM110DQ8TAY7 271 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-210ENST00000515420 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 RNF5Q99942 180 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 RDH8Q9NYR8 311 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF221Q9UK13 617 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 SPATA2Q9UM82 520 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 GAB2Q9UQC2 676 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 PLXNB1O43157 2135 aa10.1□□□□□ -0.79
CLCN3-210ENST00000515420 TCRBV4S1A1TA0A5B7 111 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 NBR2O15453 112 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
CLCN3-210ENST00000515420 NDUFA3O95167 84 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 HLA-DRB1P01911 266 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 CT45A6P0DMU7 189 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 CT45A5P0DMU8 189 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 CT45A7P0DMV0 189 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 SLC6A1P30531 599 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 NSUN5P1Q3KNT7 163 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 ZNF260Q3ZCT1 412 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 RPL39P5Q59GN2 51 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 IDNKQ5T6J7 187 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 SLC25A38Q96DW6 304 aa10.09□□□□□ -0.79
CLCN3-210ENST00000515420 MEGF8Q7Z7M0 2845 aa10.08□□□□□ -0.8
CLCN3-210ENST00000515420 H0YJW9 148 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms