RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 NDPQ00604 133 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 C5orf64Q2M2E5 130 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 RPL39P5Q59GN2 51 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 GLDNQ6ZMI3 551 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-213ENST00000511732 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 CHMP1AQ9HD42 196 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-213ENST00000511732 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 OR1A1Q9P1Q5 309 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 TRBV6-6A0A0A6YYG2 114 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 RGS10O43665 173 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
COL1A1-213ENST00000511732 ARSBP15848 533 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 CPEP16870 476 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 MAP2K4P45985 399 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 CLDN12P56749 244 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 MLLT11Q13015 90 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-213ENST00000511732 FHL3Q13643 280 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 FAM71F2Q6NXP2 309 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 FAM131AQ6UXB0 335 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 OR5M8Q8NGP6 311 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 PLGRKTQ9HBL7 147 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 PARP11Q9NR21 331 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 STEAP1Q9UHE8 339 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 SLC23A1Q9UHI7 598 aa11.92□□□□□ -0.5
COL1A1-213ENST00000511732 RAB29O14966 203 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 PROP1O75360 226 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 SCTP09683 121 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 CRHBPP24387 322 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 VEGFCP49767 419 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 HLA-DRB3P79483 266 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 DGCR2P98153 550 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 FABP5Q01469 135 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 PLA2G7Q13093 441 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 ARHGAP5-AS1Q96IT6 56 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
COL1A1-213ENST00000511732 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-213ENST00000511732 RIMS4Q9H426 269 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-213ENST00000511732 FBXL15Q9H469 300 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 SCOCQ9UIL1 159 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 HSF4Q9ULV5 492 aa11.91□□□□□ -0.5
COL1A1-213ENST00000511732 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 H0YJW9 148 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 I3L521 148 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 FCN1O00602 326 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 SOX15O60248 233 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 CALRP27797 417 aaKnown RBP11.9□□□□□ -0.5
COL1A1-213ENST00000511732 CEACAM6P40199 344 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 LINC00205P59089 165 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 GNB1P62873 340 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 TRAM1Q15629 374 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 C2orf76Q3KRA6 126 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 MOB1BQ7L9L4 216 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 PRSS48Q7RTY5 328 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 OR5B12Q96R08 314 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 MGLLQ99685 303 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 PECRQ9BY49 303 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 Q9N2K0 584 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 KIAA1456Q9P272 454 aa11.9□□□□□ -0.5
COL1A1-213ENST00000511732 IGKV1-6A0A0C4DH72 117 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 RRHO14718 337 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 RAMP3O60896 148 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 ZBTB25P24278 435 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 RAB9AP51151 201 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 CD69Q07108 199 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 RAB11BQ15907 218 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 C9orf66Q5T8R8 295 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 FAM3DQ96BQ1 224 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 PRR25Q96S07 402 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 RNF150Q9ULK6 438 aa11.89□□□□□ -0.51
COL1A1-213ENST00000511732 COL7A1Q02388 2944 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms