RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TAS2R19P59542 299 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 UBA52P62987 128 aaKnown RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 PLA2G7Q13093 441 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CBX3Q13185 183 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 DYRK1AQ13627 763 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SURF2Q15527 256 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 DEFB112Q30KQ8 113 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CT45A1Q5HYN5 189 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 TGIF2LXQ8IUE1 241 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 GDPD1Q8N9F7 314 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 TMEM229BQ8NBD8 167 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 OR1L1Q8NH94 360 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CT45A3Q8NHU0 189 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 RFESDQ8TAC1 157 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SETD6Q8TBK2 473 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CD300LFQ8TDQ1 290 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CAPSLQ8WWF8 208 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 RTN4IP1Q8WWV3 396 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 IL1F10Q8WWZ1 152 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF486Q96H40 463 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 HSD17B10Q99714 261 aaKnown RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SLC6A7Q99884 636 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SSX3Q99909 188 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 PTTG2Q9NZH5 202 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 TCF19Q9Y242 345 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 FABP12A6NFH5 140 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SSX5O60225 188 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR2F2O95006 317 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SPDEFO95238 335 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 CD74P04233 296 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SCTP09683 121 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR5H8P0DN80 308 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OMGP23515 440 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 TNFSF8P32971 234 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 FOXL1Q12952 345 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 KLRD1Q13241 179 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SLC9A3R2Q15599 337 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF66Q6ZN08 573 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 Q71RC1 249 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-205ENST00000506880 CCDC190Q86UF4 302 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 LAX1Q8IWV1 398 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF645Q8N7E2 425 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SIGLECL1Q8N7X8 197 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR5H2Q8NGV7 314 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 OR2T10Q8NGZ9 312 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 C7orf50Q9BRJ6 194 aaKnown RBP6.83□□□□□ -1.32
PDGFC-205ENST00000506880 ST6GALNAC5Q9BVH7 336 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 NPFFR1Q9GZQ6 430 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 C11orf54Q9H0W9 315 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-205ENST00000506880 MIXL1Q9H2W2 232 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 IFI27L2Q9H2X8 130 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 SLC2A8Q9NY64 477 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 RDH8Q9NYR8 311 aa6.83□□□□□ -1.32
PDGFC-205ENST00000506880 IGHV1-3A0A0C4DH29 117 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 A0A1W2PPI3 338 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 RNF212BA8MTL3 300 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF736B4DX44 427 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 CTDSP2O14595 271 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 RBFOX2O43251 390 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 CREBL2O60519 120 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 TSPAN9O75954 239 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 APOA2P02652 100 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 IFNA6P05013 189 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 GSTT2P0CG29 244 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 PPP1CCP36873 323 aaKnown RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 GDNFP39905 211 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 GPR12P47775 334 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 LGALS7P47929 136 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 THBS3P49746 956 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 IL18Q14116 193 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 HERPUD1Q15011 391 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 SSX2Q16385 188 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 RNASE10Q5GAN6 216 aaKnown RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 OLFML2AQ68BL7 652 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 Q6ZPA2 131 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 CMTM1Q8IZ96 169 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 Q8N2B8 174 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 PRR18Q8N4B5 295 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 ZDHHC22Q8N966 263 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 OR10V1Q8NGI7 309 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 OR4C13Q8NGP0 309 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 OR6Q1Q8NGQ2 317 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 OR4F5Q8NH21 305 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 ZFAND1Q8TCF1 268 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 ZNF48Q96MX3 618 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 RBM14Q96PK6 669 aaKnown RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 PRRT1Q99946 306 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 HDHD3Q9BSH5 251 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-205ENST00000506880 CCDC32Q9BV29 185 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 C16orf95Q9H693 158 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 ING3Q9NXR8 418 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 CACFD1Q9UGQ2 172 aa6.82□□□□□ -1.32
PDGFC-205ENST00000506880 MRPS7Q9Y2R9 242 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms