RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ANAPC16Q96DE5 110 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 SMOC1Q9H4F8 434 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 LOXL2Q9Y4K0 774 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 COL27A1Q8IZC6 1860 aaPredicted RBP12.63□□□□□ -0.39
SNF8-203ENST00000504000 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 C1QTNF9BB2RNN3 333 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 SOX15O60248 233 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 VENTXO95231 258 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 IL18BPO95998 194 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 MAGEA5P43359 124 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 TMEM249Q2WGJ8 235 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 CDPF1Q6NVV7 123 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 SCCPDHQ8NBX0 429 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
SNF8-203ENST00000504000 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.63□□□□□ -0.39
SNF8-203ENST00000504000 KCNS2Q9ULS6 477 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 PMS2P5A8MQ11 134 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 LY86O95711 162 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 IGKV1D-33P01593 117 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 IGKV1-33P01594 117 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 PDLIM4P50479 330 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 FAM3BP58499 235 aaPredicted RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 JOSD1Q15040 202 aaPredicted RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 GABRA6Q16445 453 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 MCEMP1Q8IX19 187 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 TMEM251Q8N6I4 163 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
SNF8-203ENST00000504000 SSX3Q99909 188 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
SNF8-203ENST00000504000 TMEM210A6NLX4 147 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 LRRC30A6NM36 301 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 CLDN1O95832 211 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 ZNF16P17020 682 aaPredicted RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 COX5AP20674 150 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 MDKP21741 143 aaPredicted RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 FBXW9Q5XUX1 488 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 WDR86Q86TI4 376 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 C14orf144Q96I85 54 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 OR5B12Q96R08 314 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 KCNIP1Q9NZI2 227 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 MKRN2OSH3BPM6 223 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 SIRPB1O00241 398 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 MT-CO3P00414 261 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 TYMSP04818 313 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 ELLP55199 621 aaPredicted RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 SSTP61278 116 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 CATR1Q13166 79 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 GAMTQ14353 236 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 OR1C1Q15619 314 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 ADIRFQ15847 76 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 TBC1D28Q2M2D7 210 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 ZNF766Q5HY98 468 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 FIP1L1Q6UN15 594 aaKnown RBP12.61□□□□□ -0.39
SNF8-203ENST00000504000 WDR31Q8NA23 367 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 SNX22Q96L94 193 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
SNF8-203ENST00000504000 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 PPP5D1E7EU14 171 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 H7BYZ3 331 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 ZNHIT1O43257 154 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 DDTP30046 118 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 IL2RGP31785 369 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 SRP14P37108 136 aaKnown RBP12.6□□□□□ -0.39
SNF8-203ENST00000504000 ZXDAP98168 799 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 PDZD11Q5EBL8 140 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 SLC35E4Q6ICL7 350 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 BEND4Q6ZU67 534 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 MDP1Q86V88 176 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 WDFY3Q8IZQ1 3526 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 OR10G9Q8NGN4 311 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 OR10G7Q8NGN6 311 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 OR1P1Q8NH06 330 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 DOCK10Q96BY6 2186 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 GALMQ96C23 342 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 BTF3L4Q96K17 158 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 CFAP54Q96N23 3096 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 DIRC2Q96SL1 478 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 PARLQ9H300 379 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
SNF8-203ENST00000504000 C21orf140B9A014 251 aa12.59□□□□□ -0.39
SNF8-203ENST00000504000 RAB29O14966 203 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms