RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	RDH12	Q96NR8	316 aa		13.44	□□□□□ -0.26
TMEM53-209	ENST00000495630	RNF5	Q99942	180 aa		13.44	□□□□□ -0.26
TMEM53-209	ENST00000495630	RSRP1	Q9BUV0	290 aa		13.44	□□□□□ -0.26
TMEM53-209	ENST00000495630	BANF2	Q9H503	90 aa		13.44	□□□□□ -0.26
TMEM53-209	ENST00000495630	STARD9	Q9P2P6	4700 aa		13.44	□□□□□ -0.26
TMEM53-209	ENST00000495630	RAB29	O14966	203 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	ATP5H	O75947	161 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	TFAP2A	P05549	437 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	GSTP1	P09211	210 aa	Known RBP	13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	MGMT	P16455	207 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	ZP3	P21754	424 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	DCK	P27707	260 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	FAM131A	Q6UXB0	335 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	CBR4	Q8N4T8	237 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	JAGN1	Q8N5M9	183 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	LFNG	Q8NES3	379 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	MRPL30	Q8TCC3	161 aa	Known RBP	13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	GHSR	Q92847	366 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630		Q96M66	194 aa		13.43	□□□□□ -0.26
TMEM53-209	ENST00000495630	TRAV8-7	A0A075B6U6	113 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR5H14	A6NHG9	310 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	PDCD6	O75340	191 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	RBBP9	O75884	186 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	TRGV3	P03979	118 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	CT45A6	P0DMU7	189 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	CT45A5	P0DMU8	189 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	CT45A7	P0DMV0	189 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	ETV1	P50549	477 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	KLF5	Q13887	457 aa	Predicted RBP	13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630		Q499Y3	187 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR2G6	Q5TZ20	316 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	AWAT2	Q6E213	333 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR13C5	Q8NGS8	318 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	PYDC1	Q8WXC3	89 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR14A2	Q96R54	314 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	IFI27L2	Q9H2X8	130 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	TUBA4B	Q9H853	241 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	STEAP1	Q9UHE8	339 aa		13.42	□□□□□ -0.26
TMEM53-209	ENST00000495630	LOC100130705	A0A1B0GUX0	176 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	CRTAP	O75718	401 aa	Predicted RBP	13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	CIB2	O75838	187 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	FST	P19883	344 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	RPS11	P62280	158 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	MOGAT2	Q3SYC2	334 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	YIF1B	Q5BJH7	314 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	DMKN	Q6E0U4	476 aa	Predicted RBP	13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR5AN1	Q8NGI8	311 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	FAM103A1	Q9BTL3	118 aa	Known RBP	13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	ABRACL	Q9P1F3	81 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	GAB2	Q9UQC2	676 aa		13.41	□□□□□ -0.26
TMEM53-209	ENST00000495630	TRBV5-7	A0A0A0MS05	114 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630		A0A0G2JLM5	398 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630		H0YJW9	148 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	BAG2	O95816	211 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	HMGN3	Q15651	99 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	C6orf141	Q5SZD1	244 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	IL34	Q6ZMJ4	242 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	OR9G4	Q8NGQ1	327 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	APH1B	Q8WW43	257 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	CLCC1	Q96S66	551 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	GHRL	Q9UBU3	117 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	SLC23A1	Q9UHI7	598 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	WASHC3	Q9Y3C0	194 aa		13.4	□□□□□ -0.26
TMEM53-209	ENST00000495630	TNC	P24821	2201 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	C13orf42	A0A1B0GVH6	325 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630		H3BUA1	57 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630		H7C2Y5	167 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	SLC22A1	O15245	554 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	ST8SIA5	O15466	376 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	CAPG	P40121	348 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	PSG5	Q15238	335 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	RPL39P5	Q59GN2	51 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	GTSCR1	Q86UQ5	136 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	TMED9	Q9BVK6	235 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	SIGLEC8	Q9NYZ4	499 aa		13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	METTL1	Q9UBP6	276 aa	Known RBP	13.39	□□□□□ -0.27
TMEM53-209	ENST00000495630	IRGM	A1A4Y4	181 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	ITGB1BP1	O14713	200 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	LALBA	P00709	142 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	TATDN3	Q17R31	274 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	IL1F10	Q8WWZ1	152 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	CYYR1	Q96J86	154 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	NEDD4L	Q96PU5	975 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	UQCC2	Q9BRT2	126 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	THAP7	Q9BT49	309 aa	Predicted RBP	13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZNF355P	Q9NSJ1	428 aa		13.38	□□□□□ -0.27
TMEM53-209	ENST00000495630		A0A1W2PPK0	400 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630		H3BNX3	289 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	WBP4	O75554	376 aa	Known RBP	13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	CA2	P00918	260 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	MYL12A	P19105	171 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	FXYD3	Q14802	87 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	SMN1	Q16637	294 aa	Known RBP	13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	LCN12	Q6JVE5	192 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZFP1	Q6P2D0	407 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	POC5	Q8NA72	575 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	PGLYRP3	Q96LB9	341 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	TSNAX	Q99598	290 aa	Known RBP	13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	SLC29A1	Q99808	456 aa		13.37	□□□□□ -0.27

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