RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 OR4F4Q96R69 305 aa9.7□□□□□ -0.86
MSH5-216ENST00000484309 RASL11BQ9BPW5 248 aa9.7□□□□□ -0.86
MSH5-216ENST00000484309 HSPB9Q9BQS6 159 aa9.7□□□□□ -0.86
MSH5-216ENST00000484309 ATG5Q9H1Y0 275 aa9.7□□□□□ -0.86
MSH5-216ENST00000484309 LIN7CQ9NUP9 197 aaKnown RBP9.7□□□□□ -0.86
MSH5-216ENST00000484309 RNF150Q9ULK6 438 aa9.7□□□□□ -0.86
MSH5-216ENST00000484309 TSSC4Q9Y5U2 329 aaPredicted RBP9.7□□□□□ -0.86
MSH5-216ENST00000484309 IGKV1-6A0A0C4DH72 117 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 RAB27BO00194 218 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 MFNGO00587 321 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
MSH5-216ENST00000484309 RAB6AP20340 208 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 GADD45AP24522 165 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 RANBP1P43487 201 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 ACTBP60709 375 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 MRPS15P82914 257 aaKnown RBP9.69□□□□□ -0.86
MSH5-216ENST00000484309 MMDQ15546 238 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 KCTD21Q4G0X4 260 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 LY6G6FQ5SQ64 297 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 FAM131AQ6UXB0 335 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 C18orf65Q6ZTR6 163 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 FOXRED2Q8IWF2 684 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 STPG2Q8N412 459 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 FAM71E2Q8N5Q1 922 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 CHPT1Q8WUD6 406 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 ZNF251Q9BRH9 671 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 C11orf54Q9H0W9 315 aaPredicted RBP9.69□□□□□ -0.86
MSH5-216ENST00000484309 ABCG5Q9H222 651 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
MSH5-216ENST00000484309 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
MSH5-216ENST00000484309 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
MSH5-216ENST00000484309 NOTOA8MTQ0 251 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 TRDCB7Z8K6 153 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 BET1O15155 118 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 FCGR3AP08637 254 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 GSTT2P0CG29 244 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 GSTT2BP0CG30 244 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 HIST1H1DP16402 221 aaKnown RBP9.68□□□□□ -0.86
MSH5-216ENST00000484309 CD36P16671 472 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 ZBTB25P24278 435 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 SDC2P34741 201 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 LGALS14Q8TCE9 139 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 KCTD7Q96MP8 289 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 RDH8Q9NYR8 311 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 PIPOXQ9P0Z9 390 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 MGAT4AQ9UM21 535 aa9.68□□□□□ -0.86
MSH5-216ENST00000484309 METTL21EPA6NDL7 271 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 AP4M1O00189 453 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 RAB29O14966 203 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 FABP7O15540 132 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 PF4P02776 101 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
MSH5-216ENST00000484309 CT45A6P0DMU7 189 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 CT45A5P0DMU8 189 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 CT45A7P0DMV0 189 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 SOX6P35712 828 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 TGFBR1P36897 503 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 SLC35B1P78383 322 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 PDLIM3Q53GG5 364 aaPredicted RBP9.67□□□□□ -0.86
MSH5-216ENST00000484309 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 SFXN4Q6P4A7 337 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 TPRA1Q86W33 373 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 DRAXINQ8NBI3 349 aaPredicted RBP9.67□□□□□ -0.86
MSH5-216ENST00000484309 OR8H1Q8NGG4 311 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 EDARADDQ8WWZ3 215 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 CENPOQ9BU64 300 aa9.67□□□□□ -0.86
MSH5-216ENST00000484309 ZNF107Q9UII5 783 aaPredicted RBP9.67□□□□□ -0.86
MSH5-216ENST00000484309 IGKV1D-8A0A087WSZ0 117 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 NUDT19A8MXV4 375 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 H7C2Y5 167 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 NBR2O15453 112 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 CD33P20138 364 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 TALDO1P37837 337 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 LINC00205P59089 165 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 RPL23AP62750 156 aaKnown RBP9.66□□□□□ -0.86
MSH5-216ENST00000484309 BEAN1Q3B7T3 259 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 SAMD5Q5TGI4 173 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 OR4A4PQ8NGN8 299 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 OR5H6Q8NGV6 325 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 PTX4Q96A99 478 aa9.66□□□□□ -0.86
MSH5-216ENST00000484309 H0YJW9 148 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 PROP1O75360 226 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
MSH5-216ENST00000484309 IGLL1P15814 213 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 KIR2DS1Q14954 304 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 TSPAN14Q8NG11 270 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 NUDCD2Q8WVJ2 157 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
MSH5-216ENST00000484309 CABLES2Q9BTV7 478 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms