RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HES3Q5TGS1 186 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 FAM180AQ6UWF9 173 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 C1orf87Q8N0U7 546 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 TCTEX1D1Q8N7M0 179 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 VSIRQ9H7M9 311 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-218ENST00000482056 SLC39A9Q9NUM3 307 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 URGCP-MRPS24S4R325 110 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 TECTAO75443 2155 aa12.94□□□□□ -0.34
C9orf3-218ENST00000482056 CYB5R3P00387 301 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-218ENST00000482056 OR3A1P47881 315 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF343Q6P1L6 599 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 TOLLIPQ9H0E2 274 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 OR51M1Q9H341 326 aa12.93□□□□□ -0.34
C9orf3-218ENST00000482056 CEBPZOSA8MTT3 80 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CLDN34H7C241 214 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CYB5BO43169 146 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 LYZL6O75951 148 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 MBP02144 154 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CXCL1P09341 107 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 FGF8P55075 233 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-218ENST00000482056 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-218ENST00000482056 ERVFRD-1P60508 538 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 ALKBH6Q3KRA9 238 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 RNFT1Q5M7Z0 435 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 NCMAPQ5T1S8 102 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 Q6ZT83 130 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 OR1L1Q8NH94 360 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 KLF14Q8TD94 323 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CIB3Q96Q77 187 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-218ENST00000482056 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 TGIF2-C20orf24A0A0A6YYL0 155 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 C12orf77C9JDV5 145 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 TUBG1P23258 451 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 S100A2P29034 98 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-218ENST00000482056 NDUFA6P56556 154 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 FAM214BQ7L5A3 538 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CA5BP1Q8WTZ4 195 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 LHX4Q969G2 390 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 TMEM147Q9BVK8 224 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CTDSP1Q9GZU7 261 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 SDF2L1Q9HCN8 221 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 TUBG2Q9NRH3 451 aa12.92□□□□□ -0.34
C9orf3-218ENST00000482056 CDX4O14627 284 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-218ENST00000482056 PSPNO60542 156 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF737O75373 536 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 KRASP01116 189 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 HBZP02008 142 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 PRR7Q8TB68 274 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 TINAGQ9UJW2 476 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 WASF3Q9UPY6 502 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
C9orf3-218ENST00000482056 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 LRRC30A6NM36 301 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF891A8MT65 544 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 G6PCP35575 357 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 MPV17P39210 176 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 RND2P52198 227 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF816Q0VGE8 651 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 CENPVQ7Z7K6 275 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ZNF808Q8N4W9 903 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-218ENST00000482056 FAM210BQ96KR6 192 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 TRIB1Q96RU8 372 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 DOK5Q9P104 306 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 RAB29O14966 203 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 CLDN14O95500 239 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 OPN1MWP04001 364 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 GABRA2P47869 451 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 PSMB3P49720 205 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 TNFSF10P50591 281 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 SOX8P57073 446 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ATP1A1-AS1Q5TC04 95 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 OR52L2PQ8NGH6 319 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 NAT8Q9UHE5 227 aa12.9□□□□□ -0.34
C9orf3-218ENST00000482056 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-218ENST00000482056 ODAMA1E959 279 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms