RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GTF2F2P13984 249 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 RPS11P62280 158 aaKnown RBP eCLIP7.07□□□□□ -1.28
VCL-204ENST00000472585 RAB40BQ12829 278 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 AKIRIN2Q53H80 203 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 RPL39P5Q59GN2 51 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 MEDAGQ5VYS4 303 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 RAB12Q6IQ22 244 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 LINC00596Q86U02 117 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 PPP1R27Q86WC6 154 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 LFNGQ8NES3 379 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 RHOXF1Q8NHV9 184 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 CENPNQ96H22 339 aaPredicted RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 RDH12Q96NR8 316 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 CLCC1Q96S66 551 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 ZNF184Q99676 751 aaPredicted RBP7.07□□□□□ -1.28
VCL-204ENST00000472585 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 BANF2Q9H503 90 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 TMEM138Q9NPI0 162 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 IMPAD1Q9NX62 359 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 PEX16Q9Y5Y5 336 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 CEPT1Q9Y6K0 416 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 MUC4Q99102 2169 aa7.07□□□□□ -1.28
VCL-204ENST00000472585 MCRIP1C9JLW8 97 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 YPEL1O60688 119 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 GPX5O75715 221 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 RGS11O94810 467 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 BRI3O95415 125 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 BAG2O95816 211 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 BDKRB2P30411 391 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 ETV1P50549 477 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 GBX2P52951 348 aaPredicted RBP7.06□□□□□ -1.28
VCL-204ENST00000472585 TPPP2P59282 170 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 DEFA5Q01523 94 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 DYRK1AQ13627 763 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 PMS2P11Q13670 270 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 ACTBL2Q562R1 376 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 C6orf141Q5SZD1 244 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 C6orf183Q5T699 404 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 OR2G6Q5TZ20 316 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 UNQ5815/PRO19632Q6UWF5 114 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 FAM131AQ6UXB0 335 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 GPR148Q8TDV2 347 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 APH1BQ8WW43 257 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 MUL1Q969V5 352 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 YPEL2Q96QA6 119 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 MRPS18AQ9NVS2 196 aaKnown RBP7.06□□□□□ -1.28
VCL-204ENST00000472585 ERGIC3Q9Y282 383 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 GMPPBQ9Y5P6 360 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 KIAA1109Q2LD37 5005 aa7.06□□□□□ -1.28
VCL-204ENST00000472585 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 TRBV5-5A0A0J9YX44 114 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 A0A1W2PPK0 400 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 ANKRD34BA5PLL1 514 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 NUPR2A6NF83 97 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 H0YJW9 148 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 EI24O14681 340 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 OGG1O15527 345 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 TRGV3P03979 118 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 MAS1P04201 325 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 HTD2P86397 168 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 PSG5Q15238 335 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 SMN1Q16637 294 aaKnown RBP7.05□□□□□ -1.28
VCL-204ENST00000472585 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 LY6G6FQ5SQ64 297 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 DMKNQ6E0U4 476 aaPredicted RBP7.05□□□□□ -1.28
VCL-204ENST00000472585 STX19Q8N4C7 294 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 OR5T1Q8NG75 326 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 MRPS24Q96EL2 167 aaKnown RBP7.05□□□□□ -1.28
VCL-204ENST00000472585 CPNE2Q96FN4 548 aaPredicted RBP7.05□□□□□ -1.28
VCL-204ENST00000472585 ABHD14BQ96IU4 210 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 OR14A2Q96R54 314 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 AGMATQ9BSE5 352 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 CST11Q9H112 138 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 RANGRFQ9HD47 186 aaPredicted RBP7.05□□□□□ -1.28
VCL-204ENST00000472585 JPT1Q9UK76 154 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
VCL-204ENST00000472585 SHISA3A0PJX4 238 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 ZNF785A8K8V0 405 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 H3BNX3 289 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 ZNF780AO75290 641 aaPredicted RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 CNIH1O95406 144 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 CA2P00918 260 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 IGKV1-16P04430 117 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 FUT3P21217 361 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 ALDH3A2P51648 485 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 TMEM267Q0VDI3 215 aaPredicted RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 PJVKQ0ZLH3 352 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 MRPL28Q13084 256 aaKnown RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 RIPK1Q13546 671 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 HMGN3Q15651 99 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 MRGPRG-AS1Q2M3A8 158 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 LCN12Q6JVE5 192 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 RPL22L1Q6P5R6 122 aaKnown RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 ZNF562Q6V9R5 426 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 TCTEX1D1Q8N7M0 179 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 ZNF485Q8NCK3 441 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms