RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 NAV1Q8NEY1 1877 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 hCG_2039718K7EN88 272 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 CDIPTO14735 213 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 KDELR3O43731 214 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 IGHV1-69P01742 117 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 AKR1C4P17516 323 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 RANBP1P43487 201 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 CTBP2P56545 445 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 PAFAH1B3Q15102 231 aaKnown RBP0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 TRMT12Q53H54 448 aaKnown RBP0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 OR10K2Q6IF99 312 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 OR5P2Q8WZ92 322 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 TRNT1Q96Q11 434 aaKnown RBP0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 ACBD6Q9BR61 282 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 VCX3BQ9H321 246 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 GAL3ST2Q9H3Q3 398 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 GOLPH3Q9H4A6 298 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 CST9LQ9H4G1 147 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 RMND1Q9NWS8 449 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 DNAJC12Q9UKB3 198 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 SYNE2Q8WXH0 6885 aaKnown RBP0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 NAV2Q8IVL1 2488 aa0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 A0A1W2PQD3 144 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 TRIM64CA6NLI5 447 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 GADD45AP24522 165 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CDK2P24941 298 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 C1QTNF8P60827 252 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 EMX1Q04741 257 aaPredicted RBP0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 MOGQ16653 247 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 DRAM2Q6UX65 266 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 SYS1Q8N2H4 156 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 TMEM75Q8N9X5 138 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 OR51T1Q8NGJ9 327 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CHST5Q9GZS9 411 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 TMBIM4Q9HC24 238 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 NRBP2Q9NSY0 501 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 GLS2Q9UI32 602 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 HHLA2Q9UM44 414 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 REREQ9P2R6 1566 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CPAMD8Q8IZJ3 1885 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 ZFC3H1O60293 1989 aaKnown RBP0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 FRAS1Q86XX4 4008 aa0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 MEIKINA0A087WXM9 373 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 BHLHE40O14503 412 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 ZMPSTE24O75844 475 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 CRYBA1P05813 215 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 ATP6V0CP27449 155 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 RPA3P35244 121 aaPredicted RBP0□□□□□ -2.41
PRPF40A-207ENST00000471701 DEKP35659 375 aaKnown RBP0□□□□□ -2.41
PRPF40A-207ENST00000471701 ACTR1BP42025 376 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 PSMB3P49720 205 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 AQP5P55064 265 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 LINC00313P59037 77 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 FAM3AP98173 230 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 LRRC75BQ2VPJ9 315 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 C7orf65Q6ZTY9 151 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 KTN1-AS1Q86SY8 53 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 IFT46Q9NQC8 304 aa0□□□□□ -2.41
PRPF40A-207ENST00000471701 BRWD1Q9NSI6 2320 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 LAMA4Q16363 1823 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 ABCB11O95342 1321 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 IGHV3-64A0A075B6Q5 118 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 VAPBO95292 243 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CRYGCP07315 174 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 RPSAP08865 295 aaKnown RBP-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 OPRM1P35372 400 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 DAPP51397 102 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 AQP4P55087 323 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CD164Q04900 197 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 Q1T7F1 81 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CAVIN4Q5BKX8 364 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CENPWQ5EE01 88 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 PID1Q7Z2X4 250 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 LFNGQ8NES3 379 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 CLDND2Q8NHS1 167 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 DMAC2Q9NW81 257 aa-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 NCOA6Q14686 2063 aaPredicted RBP-0.01□□□□□ -2.41
PRPF40A-207ENST00000471701 GRIN2BQ13224 1484 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 MGAT4DA6NG13 374 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 SNAI1O95863 264 aaPredicted RBP-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 CD7P09564 240 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 OR13C7P0DN81 318 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 BGNP21810 368 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 XRCC4Q13426 336 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 FAM19A2Q8N3H0 131 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 CCDC112Q8NEF3 446 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 FAM45AQ8TCE6 357 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 LGALS14Q8TCE9 139 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 RPS4Y2Q8TD47 263 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 MBD3L1Q8WWY6 194 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 APCP25054 2843 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 ARFGEF3Q5TH69 2177 aa-0.02□□□□□ -2.41
PRPF40A-207ENST00000471701 KIF27Q86VH2 1401 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 FSIP2Q5CZC0 6907 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 GPR171O14626 319 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 CASC3O15234 703 aaKnown RBP-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 UCHL1P09936 223 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 DEFA4P12838 97 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 CD24P25063 80 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms