RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 RHBDL2Q9NX52 303 aa13.78□□□□□ -0.2
CLDN11-202ENST00000468358 ZNF230Q9UIE0 474 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-202ENST00000468358 RAB29O14966 203 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 PKD1L1Q8TDX9 2849 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 C11orf54Q9H0W9 315 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-202ENST00000468358 MMP27Q9H306 513 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 ELF5Q9UKW6 265 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-202ENST00000468358 RNF150Q9ULK6 438 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 ETV7Q9Y603 341 aa13.77□□□□□ -0.21
CLDN11-202ENST00000468358 IGKV1-6A0A0C4DH72 117 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 GSTT2P0CG29 244 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 GSTT2BP0CG30 244 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 GNG2P59768 71 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 IGSF11Q5DX21 431 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 SLC35E3Q7Z769 313 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 Q8N6K4 173 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 OR5H6Q8NGV6 325 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 OR10J5Q8NHC4 309 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 CITED2Q99967 270 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-202ENST00000468358 RASL11BQ9BPW5 248 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 RDH8Q9NYR8 311 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 ZNF221Q9UK13 617 aa13.76□□□□□ -0.21
CLDN11-202ENST00000468358 TMEM235A6NFC5 223 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 GPR12P47775 334 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 SERPINB10P48595 397 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 SCAND1P57086 179 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 MMDQ15546 238 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 FAM71F2Q6NXP2 309 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 OR4X2Q8NGF9 303 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 OR8H1Q8NGG4 311 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 NUDCD2Q8WVJ2 157 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 GHITMQ9H3K2 345 aa13.75□□□□□ -0.21
CLDN11-202ENST00000468358 LIN7CQ9NUP9 197 aaKnown RBP13.75□□□□□ -0.21
CLDN11-202ENST00000468358 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
CLDN11-202ENST00000468358 A0A1W2PRX2 142 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 ITGB1BP1O14713 200 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 GSTP1P09211 210 aaKnown RBP13.74□□□□□ -0.21
CLDN11-202ENST00000468358 HACD4Q5VWC8 232 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 FAM131AQ6UXB0 335 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 GLDNQ6ZMI3 551 aaPredicted RBP13.74□□□□□ -0.21
CLDN11-202ENST00000468358 CROCCP3Q8IVE0 287 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 FOXRED2Q8IWF2 684 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 Q8N9W7 124 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 NOL4LQ96MY1 436 aaPredicted RBP13.74□□□□□ -0.21
CLDN11-202ENST00000468358 ZNF251Q9BRH9 671 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 ST6GALNAC5Q9BVH7 336 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLDN11-202ENST00000468358 LINC00527Q9UJ94 153 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 TRRAPQ9Y4A5 3859 aa13.74□□□□□ -0.21
CLDN11-202ENST00000468358 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 H7C2Y5 167 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 DTYMKP23919 212 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 RPS19P39019 145 aaKnown RBP13.73□□□□□ -0.21
CLDN11-202ENST00000468358 F2RL1P55085 397 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 ACTBP60709 375 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 PITPNAQ00169 270 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 NDUFA11Q86Y39 141 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 WIPF2Q8TF74 440 aaPredicted RBP13.73□□□□□ -0.21
CLDN11-202ENST00000468358 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 AGMATQ9BSE5 352 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 DIABLOQ9NR28 239 aa13.73□□□□□ -0.21
CLDN11-202ENST00000468358 TRBV6-7A0A0A0MS04 114 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 TCRBV4S1A1TA0A5B7 111 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 IGHG2P01859 326 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 SOX6P35712 828 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 NCS1P62166 190 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 PNLIPRP3Q17RR3 467 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 ZNF260Q3ZCT1 412 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 C10orf99Q6UWK7 81 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
CLDN11-202ENST00000468358 OR13F1Q8NGS4 319 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 R3HDM4Q96D70 268 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 OR2D2Q9H210 308 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 ABCG5Q9H222 651 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 PLSCR3Q9NRY6 295 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 KIAA1456Q9P272 454 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
CLDN11-202ENST00000468358 IGKV1D-8A0A087WSZ0 117 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 OR5H14A6NHG9 310 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 KCNAB3O43448 404 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 TMEM127O75204 238 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 OPN1MWP04001 364 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 SMIM18P0DKX4 95 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
CLDN11-202ENST00000468358 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms