RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SOX6P35712 828 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 TGFBR1P36897 503 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 RAB11BQ15907 218 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 PNLIPRP3Q17RR3 467 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 BCL7BQ9BQE9 202 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 NICN1Q9BSH3 213 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 GPR61Q9BZJ8 451 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 MGAT4AQ9UM21 535 aa15.04■□□□□ -0
COL7A1-207ENST00000467985 TRBV6-6A0A0A6YYG2 114 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 NUDT19A8MXV4 375 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 OR10A3P58181 314 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 P2RY14Q15391 338 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 CTF1Q16619 201 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 FOXB2Q5VYV0 432 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 ZNF880Q6PDB4 577 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 Q6ZPA2 131 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 FAM89BQ8N5H3 189 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 LINC00482Q8N8I6 264 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 IL1F10Q8WWZ1 152 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 ISOC1Q96CN7 298 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 CYYR1Q96J86 154 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 LPAR5Q9H1C0 372 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 KCNK15Q9H427 330 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 NDUFA13Q9P0J0 144 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 ZNF580Q9UK33 172 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 HSF4Q9ULV5 492 aa15.03■□□□□ -0
COL7A1-207ENST00000467985 SMIM31A0A1B0GVY4 71 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 SHISA3A0PJX4 238 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 LINC01548A6NM66 108 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 F2RL1P55085 397 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 HES5Q5TA89 166 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 FAM71F2Q6NXP2 309 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 ZNF833PQ6ZTB9 187 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 ZNF695Q8IW36 515 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 ODF3L1Q8IXM7 274 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 MRAPQ8TCY5 172 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 GFI1Q99684 422 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 GHITMQ9H3K2 345 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 AURKAIP1Q9NWT8 199 aaPredicted RBP15.02■□□□□ -0
COL7A1-207ENST00000467985 RSL24D1Q9UHA3 163 aaKnown RBP15.02■□□□□ -0
COL7A1-207ENST00000467985 CEPT1Q9Y6K0 416 aa15.02■□□□□ -0
COL7A1-207ENST00000467985 A0A0A6YYD4 124 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 NOTOA8MTQ0 251 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 CLEC2LP0C7M8 214 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 MYCNOSP40205 109 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 THBS3P49746 956 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 FOXE3Q13461 319 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 MMDQ15546 238 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 C5orf24Q7Z6I8 188 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 MRPL41Q8IXM3 137 aaKnown RBP15.01□□□□□ -0.01
COL7A1-207ENST00000467985 KLHL30-AS1Q8NEE0 82 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 SETD6Q8TBK2 473 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 NABP2Q9BQ15 211 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 MRPL20Q9BYC9 149 aaKnown RBP15.01□□□□□ -0.01
COL7A1-207ENST00000467985 DCSTAMPQ9H295 470 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 PIPOXQ9P0Z9 390 aa15.01□□□□□ -0.01
COL7A1-207ENST00000467985 SAA2-SAA4A0A096LPE2 208 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 DPPA5A6NC42 116 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 RAB29O14966 203 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 SOCS1O15524 211 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 IGF1P05019 195 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 ELANEP08246 267 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 SAA2P0DJI9 122 aaPredicted RBP15□□□□□ -0.01
COL7A1-207ENST00000467985 OR5H8P0DN80 308 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 VDAC1P21796 283 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 OR3A3P47888 321 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 ACTBP60709 375 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 CXorf66Q5JRM2 361 aaPredicted RBP15□□□□□ -0.01
COL7A1-207ENST00000467985 SFXN4Q6P4A7 337 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 ETV3LQ6ZN32 361 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 C8orf86Q6ZUL3 223 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 CROCCP3Q8IVE0 287 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 RNF152Q8N8N0 203 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 OR56B1Q8NGI3 324 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 FAM3DQ96BQ1 224 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 ZNF251Q9BRH9 671 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 MCRIP2Q9BUT9 160 aaKnown RBP15□□□□□ -0.01
COL7A1-207ENST00000467985 IFI27L2Q9H2X8 130 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 C12orf4Q9NQ89 552 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 SLC23A1Q9UHI7 598 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 ZNF107Q9UII5 783 aaPredicted RBP15□□□□□ -0.01
COL7A1-207ENST00000467985 AK3Q9UIJ7 227 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 DAPK2Q9UIK4 370 aa15□□□□□ -0.01
COL7A1-207ENST00000467985 IFITM5A6NNB3 132 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 H3BMQ9 156 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 ITGB1BP1O14713 200 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 IDNKQ5T6J7 187 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 EDARADDQ8WWZ3 215 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 DPF1Q92782 380 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 HSPB9Q9BQS6 159 aa14.99□□□□□ -0.01
COL7A1-207ENST00000467985 FOXI3A8MTJ6 420 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-207ENST00000467985 NBR2O15453 112 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 IGHG4P01861 327 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 ZBTB25P24278 435 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 RPS19P39019 145 aaKnown RBP14.98□□□□□ -0.01
COL7A1-207ENST00000467985 CDX1P47902 265 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-207ENST00000467985 VEGFCP49767 419 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 CLDN12P56749 244 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 SPCS2Q15005 226 aa14.98□□□□□ -0.01
COL7A1-207ENST00000467985 C2orf76Q3KRA6 126 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms