RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
CPSF6-203ENST00000456847 SCTP09683 121 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 SLC2A2P11168 524 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-203ENST00000456847 RAB6AP20340 208 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 SOX6P35712 828 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 CEACAM6P40199 344 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 MOGAT2Q3SYC2 334 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 ZNF251Q9BRH9 671 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 PARP12Q9H0J9 701 aaKnown RBP12.8□□□□□ -0.36
CPSF6-203ENST00000456847 METTL21EPA6NDL7 271 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 LINC01548A6NM66 108 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 ACTBP60709 375 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 BEAN1Q3B7T3 259 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 RPL39P5Q59GN2 51 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 FAM71E2Q8N5Q1 922 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 ABHD14BQ96IU4 210 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 GON7Q9BXV9 100 aa12.8□□□□□ -0.36
CPSF6-203ENST00000456847 ZNF107Q9UII5 783 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-203ENST00000456847 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 GNB3P16520 340 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 FGF9P31371 208 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-203ENST00000456847 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
CPSF6-203ENST00000456847 NEDD8Q15843 81 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 OXLD1Q5BKU9 147 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 PHF21AQ96BD5 680 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 KIAA1456Q9P272 454 aa12.79□□□□□ -0.36
CPSF6-203ENST00000456847 ITGB1BP1O14713 200 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 VDAC1P21796 283 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 ARFRP1Q13795 201 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 C11orf54Q9H0W9 315 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-203ENST00000456847 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 NBR2O15453 112 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 FCGR3AP08637 254 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 HIST1H1DP16402 221 aaKnown RBP12.78□□□□□ -0.36
CPSF6-203ENST00000456847 CNTFRP26992 372 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 GLDNQ6ZMI3 551 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-203ENST00000456847 NR2C2APQ86WQ0 139 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 CHCHD6Q9BRQ6 235 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 OR51E2Q9H255 320 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 ZNF221Q9UK13 617 aa12.78□□□□□ -0.36
CPSF6-203ENST00000456847 H7C2Y5 167 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 MFNGO00587 321 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 FABP7O15540 132 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 TALDO1P37837 337 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 PNLIPRP3Q17RR3 467 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 CXorf66Q5JRM2 361 aaPredicted RBP12.77□□□□□ -0.37
CPSF6-203ENST00000456847 TPRA1Q86W33 373 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 PTX4Q96A99 478 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 KCTD7Q96MP8 289 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 ZFP57Q9NU63 452 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 RDH8Q9NYR8 311 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 DAPK2Q9UIK4 370 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 RNF150Q9ULK6 438 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 KCNK7Q9Y2U2 307 aa12.77□□□□□ -0.37
CPSF6-203ENST00000456847 LOC100506127A0A0U1RQW1 187 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 RAB27BO00194 218 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 BET1O15155 118 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 SERPINB10P48595 397 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 MAFIPQ8WZ33 124 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 RITA1Q96K30 269 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 GSTP1P09211 210 aaKnown RBP12.76□□□□□ -0.37
CPSF6-203ENST00000456847 CT45A6P0DMU7 189 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 CT45A5P0DMU8 189 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 CT45A7P0DMV0 189 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 IGLL1P15814 213 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 MXD1Q05195 221 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 PLGLAQ15195 96 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-203ENST00000456847 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 PARP11Q9NR21 331 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
CPSF6-203ENST00000456847 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-203ENST00000456847 MC5RP33032 325 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 C5orf64Q2M2E5 130 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 SFXN4Q6P4A7 337 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 OR10J5Q8NHC4 309 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 AGMATQ9BSE5 352 aa12.75□□□□□ -0.37
CPSF6-203ENST00000456847 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
CPSF6-203ENST00000456847 H0YJW9 148 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 HLA-DRB1P01911 266 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 RPLP1P05386 114 aaKnown RBP12.74□□□□□ -0.37
CPSF6-203ENST00000456847 GSTT2P0CG29 244 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 GSTT2BP0CG30 244 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms