RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 RAB6AP20340 208 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 ZBTB25P24278 435 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 CNTFRP26992 372 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 GPR12P47775 334 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 MRPS15P82914 257 aaKnown RBP11.64□□□□□ -0.55
USE1-202ENST00000445667 FOXRED2Q8IWF2 684 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 STPG2Q8N412 459 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 OR8H1Q8NGG4 311 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 CHCHD6Q9BRQ6 235 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 C11orf54Q9H0W9 315 aaPredicted RBP11.64□□□□□ -0.55
USE1-202ENST00000445667 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 RNF150Q9ULK6 438 aa11.64□□□□□ -0.55
USE1-202ENST00000445667 TRDCB7Z8K6 153 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 RAB29O14966 203 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 CLEC2LP0C7M8 214 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 PF4V1P10720 104 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 GADD45AP24522 165 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 SDC2P34741 201 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 ACTBP60709 375 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 MMDQ15546 238 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 KCTD21Q4G0X4 260 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 PDLIM3Q53GG5 364 aaPredicted RBP11.63□□□□□ -0.55
USE1-202ENST00000445667 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 GLDNQ6ZMI3 551 aaPredicted RBP11.63□□□□□ -0.55
USE1-202ENST00000445667 TPRA1Q86W33 373 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 FAM71E2Q8N5Q1 922 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 MAFIPQ8WZ33 124 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 AGMATQ9BSE5 352 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
USE1-202ENST00000445667 DAPK2Q9UIK4 370 aa11.63□□□□□ -0.55
USE1-202ENST00000445667 ELF5Q9UKW6 265 aaPredicted RBP11.63□□□□□ -0.55
USE1-202ENST00000445667 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 AP4M1O00189 453 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 MFNGO00587 321 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 ITGB1BP1O14713 200 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 FCGR3AP08637 254 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 GSTT2BP0CG30 244 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 CT45A6P0DMU7 189 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 CT45A5P0DMU8 189 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 CT45A7P0DMV0 189 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 SNRPBP14678 240 aaKnown RBP11.62□□□□□ -0.55
USE1-202ENST00000445667 HIST1H1DP16402 221 aaKnown RBP11.62□□□□□ -0.55
USE1-202ENST00000445667 CD36P16671 472 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 SOX6P35712 828 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 MXD1Q05195 221 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 FAM131AQ6UXB0 335 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 C18orf65Q6ZTR6 163 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 PTX4Q96A99 478 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 KCTD7Q96MP8 289 aa11.62□□□□□ -0.55
USE1-202ENST00000445667 LOC100506127A0A0U1RQW1 187 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 BET1O15155 118 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 FABP7O15540 132 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 PROP1O75360 226 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 PF4P02776 101 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 LINC00205P59089 165 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 SLC35B1P78383 322 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 ARFRP1Q13795 201 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 BEAN1Q3B7T3 259 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 CDNFQ49AH0 187 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 IGSF11Q5DX21 431 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 FAM71F2Q6NXP2 309 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 SFXN4Q6P4A7 337 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 LCNL1Q6ZST4 164 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 DRAXINQ8NBI3 349 aaPredicted RBP11.61□□□□□ -0.55
USE1-202ENST00000445667 OR4A4PQ8NGN8 299 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 EDARADDQ8WWZ3 215 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 PHF21AQ96BD5 680 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 RDH8Q9NYR8 311 aa11.61□□□□□ -0.55
USE1-202ENST00000445667 CD33P20138 364 aa11.6□□□□□ -0.55
USE1-202ENST00000445667 RPL23AP62750 156 aaKnown RBP11.6□□□□□ -0.55
USE1-202ENST00000445667 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
USE1-202ENST00000445667 CENPOQ9BU64 300 aa11.6□□□□□ -0.55
USE1-202ENST00000445667 ZNF107Q9UII5 783 aaPredicted RBP11.6□□□□□ -0.55
USE1-202ENST00000445667 ZNF221Q9UK13 617 aa11.6□□□□□ -0.55
USE1-202ENST00000445667 PLXNB1O43157 2135 aa11.6□□□□□ -0.55
USE1-202ENST00000445667 IGKV1D-8A0A087WSZ0 117 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 H0YJW9 148 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 H7C2Y5 167 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 NBR2O15453 112 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 PRB2P02812 416 aaPredicted RBP11.59□□□□□ -0.55
USE1-202ENST00000445667 IGLL1P15814 213 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 TALDO1P37837 337 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 KIR2DS1Q14954 304 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 TEX38Q6PEX7 206 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 COMMD1Q8N668 190 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 WFDC9Q8NEX5 89 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 NPBQ8NG41 125 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 GHITMQ9H3K2 345 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
USE1-202ENST00000445667 TRBV6-7A0A0A0MS04 114 aa11.58□□□□□ -0.56
USE1-202ENST00000445667 NUDT19A8MXV4 375 aa11.58□□□□□ -0.56
USE1-202ENST00000445667 RRP9O43818 475 aaKnown RBP11.58□□□□□ -0.56
USE1-202ENST00000445667 RPLP1P05386 114 aaKnown RBP11.58□□□□□ -0.56
USE1-202ENST00000445667 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
USE1-202ENST00000445667 OR8U9P0C7N5 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms