RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PSMB11A5LHX3 300 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 TRDCB7Z8K6 153 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 OPN1MWP04001 364 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 FCGR3AP08637 254 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
LIMS4-201ENST00000413601 HIST1H1DP16402 221 aaKnown RBP11.71□□□□□ -0.53
LIMS4-201ENST00000413601 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 SFXN4Q6P4A7 337 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 TSPAN14Q8NG11 270 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 RITA1Q96K30 269 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 RASL11BQ9BPW5 248 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 ZNF251Q9BRH9 671 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 AGMATQ9BSE5 352 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 CENPOQ9BU64 300 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 C11orf54Q9H0W9 315 aaPredicted RBP11.71□□□□□ -0.53
LIMS4-201ENST00000413601 ABCG5Q9H222 651 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 PIPOXQ9P0Z9 390 aa11.71□□□□□ -0.53
LIMS4-201ENST00000413601 ELF5Q9UKW6 265 aaPredicted RBP11.71□□□□□ -0.53
LIMS4-201ENST00000413601 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 RAB29O14966 203 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 GPR12P47775 334 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 DEFA6Q01524 100 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 C1QL4Q86Z23 238 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 FOXRED2Q8IWF2 684 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 OR8H1Q8NGG4 311 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 OR4A4PQ8NGN8 299 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 CHPT1Q8WUD6 406 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 EDARADDQ8WWZ3 215 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 MAFIPQ8WZ33 124 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
LIMS4-201ENST00000413601 RNF150Q9ULK6 438 aa11.7□□□□□ -0.54
LIMS4-201ENST00000413601 A0A087WXM4 84 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 FABP7O15540 132 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 KCNAB3O43448 404 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 GSTT2BP0CG30 244 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 CNTFRP26992 372 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 ACTBP60709 375 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 MMDQ15546 238 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 CDNFQ49AH0 187 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 IGSF11Q5DX21 431 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 KHDC1LQ5JSQ8 128 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 GLDNQ6ZMI3 551 aaPredicted RBP11.69□□□□□ -0.54
LIMS4-201ENST00000413601 STPG2Q8N412 459 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 LGALS14Q8TCE9 139 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 RDH8Q9NYR8 311 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 TSSC4Q9Y5U2 329 aaPredicted RBP11.69□□□□□ -0.54
LIMS4-201ENST00000413601 CMYA5Q8N3K9 4069 aa11.69□□□□□ -0.54
LIMS4-201ENST00000413601 BET1O15155 118 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 WIPF1O43516 503 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 CT45A6P0DMU7 189 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 CT45A5P0DMU8 189 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 CT45A7P0DMV0 189 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 SOX6P35712 828 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 TALDO1P37837 337 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 FAM131AQ6UXB0 335 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 PHF21AQ96BD5 680 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
LIMS4-201ENST00000413601 AP4M1O00189 453 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 PROP1O75360 226 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 TGFBR1P36897 503 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 SERPINB10P48595 397 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 SLC35B1P78383 322 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 DRAXINQ8NBI3 349 aaPredicted RBP11.67□□□□□ -0.54
LIMS4-201ENST00000413601 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 OR10J5Q8NHC4 309 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 CABLES2Q9BTV7 478 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIMS4-201ENST00000413601 ZNF221Q9UK13 617 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 MEGF8Q7Z7M0 2845 aa11.67□□□□□ -0.54
LIMS4-201ENST00000413601 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 TRBV6-7A0A0A0MS04 114 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 OR5H14A6NHG9 310 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 G3V4G9 280 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 H0YJW9 148 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 NBR2O15453 112 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 AIREO43918 545 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 PF4V1P10720 104 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 LINC00205P59089 165 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 ARL6IP1Q15041 203 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 HACD4Q5VWC8 232 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 YIPF6Q96EC8 236 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 TOLLIPQ9H0E2 274 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 RHBDL2Q9NX52 303 aa11.66□□□□□ -0.54
LIMS4-201ENST00000413601 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
LIMS4-201ENST00000413601 TMEM235A6NFC5 223 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms