RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CA11O75493 328 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 MPZL1O95297 269 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 PTBP3O95758 552 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RENP00797 406 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 GLAP06280 429 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 MSMBP08118 114 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CHRM2P08172 466 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 MRPL3P09001 348 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 OR8U8P0C7N1 319 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 SEC11BP0C7V7 166 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 PET100P0DJ07 73 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 MUC1P15941 1255 aaPredicted RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TUBG1P23258 451 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ACKR3P25106 362 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CRABP1P29762 137 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 GPX4P36969 197 aaPredicted RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CDKN2AP42771 156 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 PCP4P48539 62 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ATP1B3P54709 279 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 LMO4P61968 165 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 LSM6P62312 80 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 QRFPP83859 136 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 FABP9Q0Z7S8 132 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 PCK2Q16822 640 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF260Q3ZCT1 412 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RNASE12Q5GAN4 147 aaKnown RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 OR10K2Q6IF99 312 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 LEG1Q6P5S2 330 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 DNM1P34Q6PK57 102 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 FAM220AQ7Z4H9 259 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 BPIFB2Q8N4F0 458 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RFLNBQ8N5W9 214 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 NKAIN3Q8N8D7 197 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CYB561A3Q8NBI2 242 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 OR51D1Q8NGF3 324 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 OR51F2Q8NH61 342 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 OR1F12Q8NHA8 337 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TERB2Q8NHR7 220 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ZNRF4Q8WWF5 429 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RAB1CQ92928 201 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM106AQ96A25 262 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 MRGPRFQ96AM1 343 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM186Q96B77 213 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RAB39BQ96DA2 213 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CMBLQ96DG6 245 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 RAB3CQ96E17 227 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TIMD4Q96H15 378 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TSSK2Q96PF2 358 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 PFDN5Q99471 154 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 SLC6A7Q99884 636 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 C2orf88Q9BSF0 95 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 GGACTQ9BVM4 153 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CHST5Q9GZS9 411 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TOLLIPQ9H0E2 274 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 CST11Q9H112 138 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 METTL9Q9H1A3 318 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 SAP30LQ9HAJ7 183 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 LPAR2Q9HBW0 351 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 TUBG2Q9NRH3 451 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF230Q9UIE0 474 aaPredicted RBP4.41□□□□□ -1.7
LINC00342-201ENST00000412393 ZDHHC8Q9ULC8 765 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 GPR132Q9UNW8 380 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 B9D1Q9UPM9 204 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 POLR1DQ9Y2S0 133 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 WIPI2Q9Y4P8 454 aa4.41□□□□□ -1.7
LINC00342-201ENST00000412393 FBN1P35555 2871 aaKnown RBP4.4□□□□□ -1.7
LINC00342-201ENST00000412393 IGLV1-36A0A0B4J1U3 117 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 C7orf77A4D0Y5 90 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OR6C6A6NF89 314 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PRR32B1ATL7 298 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 RAB27BO00194 218 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 DCTN6O00399 190 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SRSF10O75494 262 aaKnown RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 GPANK1O95872 356 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 IFNA17P01571 189 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HLA-AP01891 365 aaKnown RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 CD2P06729 351 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 CD55P08174 381 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 ELANEP08246 267 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SFTA3P0C7M3 94 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PGAM2P15259 253 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 TNFSF4P23510 183 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HTR2CP28335 458 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HSD11B1P28845 292 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PSMB10P40306 273 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 EFNB2P52799 333 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 CLDN12P56749 244 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 RAB2AP61019 212 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HIST1H3AP68431 136 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 TNFAIP6P98066 277 aaPredicted RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PSG7Q13046 419 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 MEP1BQ16820 701 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 KRTAP24-1Q3LI83 254 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SPRNQ5BIV9 151 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 RNASE10Q5GAN6 216 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms