RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DMKNQ6E0U4 476 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LYPD6Q86Y78 171 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ANKRD13BQ86YJ7 626 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SGPP2Q8IWX5 399 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RHOVQ96L33 236 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CLCC1Q96S66 551 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RSRP1Q9BUV0 290 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 C9orf16Q9BUW7 83 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RNF150Q9ULK6 438 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 STUB1Q9UNE7 303 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 GAB2Q9UQC2 676 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LRRC42Q9Y546 428 aa10.94□□□□□ -0.66
HLA-DQB2-229ENST00000411527 A8MZ25 164 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ARPC1BO15143 372 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PDCD6O75340 191 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 WBP4O75554 376 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 IGLV1-51P01701 117 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CD40LGP29965 261 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CAPGP40121 348 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 VEGFCP49767 419 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TPPP2P59282 170 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 AKIRIN2Q53H80 203 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RPL39P5Q59GN2 51 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ZFP1Q6P2D0 407 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 GLDNQ6ZMI3 551 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CDH26Q8IXH8 852 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ZFP41Q8N8Y5 198 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 LFNGQ8NES3 379 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 IL1F10Q8WWZ1 152 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FAM46BQ96A09 425 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 OR14A2Q96R54 314 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 IFI27L2Q9H2X8 130 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PIPOXQ9P0Z9 390 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 STEAP1Q9UHE8 339 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CLEC2DQ9UHP7 191 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
HLA-DQB2-229ENST00000411527 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TRBV5-7A0A0A0MS05 114 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 H7C2Y5 167 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TRGV3P03979 118 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ARSBP15848 533 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 MYL12AP19105 171 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 MC5RP33032 325 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 HMGN3Q15651 99 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FAM71F2Q6NXP2 309 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SPATA25Q9BR10 227 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SLA2Q9H6Q3 261 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ABRACLQ9P1F3 81 aa10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 DIMT1Q9UNQ2 313 aaKnown RBP10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 EXOSC1Q9Y3B2 195 aaKnown RBP10.92□□□□□ -0.66
HLA-DQB2-229ENST00000411527 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 OR5H14A6NHG9 310 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RAB29O14966 203 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 HAGHQ16775 308 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 C6orf141Q5SZD1 244 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ABHD14BQ96IU4 210 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SULT4A1Q9BR01 284 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 FAAP24Q9BTP7 215 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RANGRFQ9HD47 186 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ZNF355PQ9NSJ1 428 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 METTL1Q9UBP6 276 aaKnown RBP10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 WASHC3Q9Y3C0 194 aa10.91□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PNMA8CA0A1B0GUJ8 204 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 H0YJW9 148 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RBBP9O75884 186 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 IFNA6P05013 189 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TFAP2AP05549 437 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 SNRPBP14678 240 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 PSG5Q15238 335 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 ZNF555Q8NEP9 628 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TMEM80Q96HE8 168 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 DERL3Q96Q80 235 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 RNF5Q99942 180 aa10.9□□□□□ -0.66
HLA-DQB2-229ENST00000411527 TNCP24821 2201 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 C13orf42A0A1B0GVH6 325 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ANKRD34BA5PLL1 514 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CA2P00918 260 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZP3P21754 424 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 MED21Q13503 144 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 C6orf201Q7Z4U5 140 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 NKAIN3Q8N8D7 197 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZNF485Q8NCK3 441 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 OR5AN1Q8NGI8 311 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SETD6Q8TBK2 473 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 UQCC2Q9BRT2 126 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TUBA4BQ9H853 241 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms