RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
SEC13-203ENST00000383801 MRPS11P82912 194 aaKnown RBP11.26□□□□□ -0.61
SEC13-203ENST00000383801 HFEQ30201 348 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 ZNF585BQ52M93 769 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 BAP18Q8IXM2 172 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 TPRX1Q8N7U7 411 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 RAB39BQ96DA2 213 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 CCL13Q99616 98 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 GAL3ST2Q9H3Q3 398 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 GNG12Q9UBI6 72 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 LSM5Q9Y4Y9 91 aaKnown RBP11.26□□□□□ -0.61
SEC13-203ENST00000383801 TANC2Q9HCD6 1990 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 DSCAMO60469 2012 aa11.26□□□□□ -0.61
SEC13-203ENST00000383801 IGHV1-69-2A0A0G2JMI3 117 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEC13-203ENST00000383801 ADAM20O43506 726 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 SPDEFO95238 335 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 GOSR1O95249 250 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 CLDN1O95832 211 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
SEC13-203ENST00000383801 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 HOXA4Q00056 320 aaPredicted RBP11.25□□□□□ -0.61
SEC13-203ENST00000383801 C17orf58Q2M2W7 97 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 FAM201AQ5SY85 155 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 CCL17Q92583 94 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 IDI2-AS1Q9NZ38 188 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 SLC25A10Q9UBX3 287 aaPredicted RBP11.25□□□□□ -0.61
SEC13-203ENST00000383801 MMP24Q9Y5R2 645 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 FAM90A9PA6NNJ1 464 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 NDUFB3O43676 98 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 LY86O95711 162 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 SCGB1D2O95969 90 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 TFF1P04155 84 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 GPR12P47775 334 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 SNTB1Q13884 538 aaKnown RBP11.25□□□□□ -0.61
SEC13-203ENST00000383801 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 DMBX1Q8NFW5 382 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 PARP12Q9H0J9 701 aaKnown RBP11.25□□□□□ -0.61
SEC13-203ENST00000383801 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 SDHAF2Q9NX18 166 aa11.25□□□□□ -0.61
SEC13-203ENST00000383801 HCFC1P51610 2035 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 CACNA1DQ01668 2161 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 RRASP10301 218 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
SEC13-203ENST00000383801 TAS2R30P59541 319 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 BAXQ07812 192 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 FGFRL1Q8N441 504 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 NEU4Q8WWR8 484 aaPredicted RBP11.24□□□□□ -0.61
SEC13-203ENST00000383801 NEUROG1Q92886 237 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 GPR146Q96CH1 333 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 CBLN4Q9NTU7 201 aa11.24□□□□□ -0.61
SEC13-203ENST00000383801 SPTA1P02549 2419 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 DSCAML1Q8TD84 2053 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 WRBO00258 174 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 TOR1AO14656 332 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 RAB29O14966 203 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 SIAH2O43255 324 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 MED6O75586 246 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 PLAUP00749 431 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 NMBP08949 121 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 DAOP14920 347 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
SEC13-203ENST00000383801 LPAR6P43657 344 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 AKR1C2P52895 323 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 TMEM33P57088 247 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 VAMP2P63027 116 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
SEC13-203ENST00000383801 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
SEC13-203ENST00000383801 RPUSD1Q9UJJ7 312 aaKnown RBP11.23□□□□□ -0.61
SEC13-203ENST00000383801 RNF150Q9ULK6 438 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
SEC13-203ENST00000383801 PRELID3BQ9Y3B1 194 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
SEC13-203ENST00000383801 TRBV23-1A0A0A0MS06 115 aa11.22□□□□□ -0.61
SEC13-203ENST00000383801 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
SEC13-203ENST00000383801 ZG16O60844 167 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms