RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 MFNGO00587 321 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 PROP1O75360 226 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 CD3GP09693 182 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 RAB6AP20340 208 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 GADD45AP24522 165 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 GPR12P47775 334 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 SAMD5Q5TGI4 173 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 ZNF230Q9UIE0 474 aaPredicted RBP12.12□□□□□ -0.47
RAB4B-202ENST00000378307 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
RAB4B-202ENST00000378307 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
RAB4B-202ENST00000378307 SDC2P34741 201 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 LINC00205P59089 165 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 KCTD21Q4G0X4 260 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
RAB4B-202ENST00000378307 OXLD1Q5BKU9 147 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
RAB4B-202ENST00000378307 STPG2Q8N412 459 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 OR4X2Q8NGF9 303 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 SSR3Q9UNL2 185 aa12.11□□□□□ -0.47
RAB4B-202ENST00000378307 IGKV1D-8A0A087WSZ0 117 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 FCGR3AP08637 254 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 GSTT2BP0CG30 244 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 HIST1H1DP16402 221 aaKnown RBP12.1□□□□□ -0.47
RAB4B-202ENST00000378307 CD36P16671 472 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 ZBTB25P24278 435 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 ACTBP60709 375 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 IGSF11Q5DX21 431 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 LCNL1Q6ZST4 164 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 OR8H1Q8NGG4 311 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 PTX4Q96A99 478 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 RASL11BQ9BPW5 248 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 CENPOQ9BU64 300 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 PIPOXQ9P0Z9 390 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 DAPK2Q9UIK4 370 aa12.1□□□□□ -0.47
RAB4B-202ENST00000378307 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 RAB29O14966 203 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 HSPA12AO43301 675 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 TGFBR1P36897 503 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 MXD1Q05195 221 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 MMDQ15546 238 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 KHDC1LQ5JSQ8 128 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 SFXN4Q6P4A7 337 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 FAM131AQ6UXB0 335 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 TPRA1Q86W33 373 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 FOXRED2Q8IWF2 684 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 MGAT4AQ9UM21 535 aa12.09□□□□□ -0.47
RAB4B-202ENST00000378307 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 AP4M1O00189 453 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 FABP7O15540 132 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 PRB2P02812 416 aaPredicted RBP12.08□□□□□ -0.48
RAB4B-202ENST00000378307 SOX6P35712 828 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 RANBP1P43487 201 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
RAB4B-202ENST00000378307 FAM71F2Q6NXP2 309 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
RAB4B-202ENST00000378307 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 KCTD7Q96MP8 289 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
RAB4B-202ENST00000378307 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
RAB4B-202ENST00000378307 TGP01266 2768 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 METTL21EPA6NDL7 271 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 H0YJW9 148 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 BET1O15155 118 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
RAB4B-202ENST00000378307 PF4V1P10720 104 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 IGLL1P15814 213 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 CFHR3Q02985 330 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 CDNFQ49AH0 187 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 KPRPQ5T749 579 aaPredicted RBP12.07□□□□□ -0.48
RAB4B-202ENST00000378307 ZNF383Q8NA42 475 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 NPBQ8NG41 125 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 OR4A4PQ8NGN8 299 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 OR5H6Q8NGV6 325 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 LGALS14Q8TCE9 139 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 CABLES2Q9BTV7 478 aa12.07□□□□□ -0.48
RAB4B-202ENST00000378307 TRBV6-7A0A0A0MS04 114 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 NBR2O15453 112 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 NDUFA3O95167 84 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 IGF1P05019 195 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 SLC35B1P78383 322 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
RAB4B-202ENST00000378307 PNLIPRP3Q17RR3 467 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms