RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 OR1E2P47887 323 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 AKR1C2P52895 323 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 LINC00313P59037 77 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 DAD1P61803 113 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 TPM4P67936 248 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 LRRC26Q2I0M4 334 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 SPIN4Q56A73 249 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 DRAM2Q6UX65 266 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 PLCZ1Q86YW0 608 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 CCDC112Q8NEF3 446 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 OR11H1Q8NG94 326 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 OR51H1Q8NH63 302 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 GPR119Q8TDV5 335 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 SLC37A2Q8TED4 501 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 CYGBQ8WWM9 190 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 AICDAQ9GZX7 198 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 UBQLN4Q9NRR5 601 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 PARVAQ9NVD7 372 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 FAM206AQ9NX38 181 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 C15orf41Q9Y2V0 281 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 FBN3Q75N90 2809 aa0.91□□□□□ -2.26
VPS13A-206ENST00000376646 TINCRA0A1B0GVN0 87 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 GOLGA8KD6RF30 607 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 GOLGA8MH3BSY2 632 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 COPEO14579 308 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 MRASO14807 208 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 BIRC5O15392 142 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 SOD1P00441 154 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ATP5G1P05496 136 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 CRYBA1P05813 215 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 LINC00614P0C842 121 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ESDP10768 282 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 CXCL3P19876 107 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 DAPP51397 102 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 H2BFSP57053 126 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 MAP3K7CLP57077 242 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 HERVK_113P63121 156 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 TMEM267Q0VDI3 215 aaPredicted RBP0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ZNF181Q2M3W8 571 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ZNF322Q6U7Q0 402 aaPredicted RBP0.9□□□□□ -2.26
VPS13A-206ENST00000376646 FAM9CQ8IZT9 166 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ZNF567Q8N184 647 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 OR10A6Q8NH74 314 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ERMNQ8TAM6 284 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ZCCHC13Q8WW36 166 aaKnown RBP0.9□□□□□ -2.26
VPS13A-206ENST00000376646 TLCD1Q96CP7 247 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 UPK3BQ9BT76 320 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 TIPINQ9BVW5 301 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 C1QTNF6Q9BXI9 259 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 EIF5A2Q9GZV4 153 aaKnown RBP0.9□□□□□ -2.26
VPS13A-206ENST00000376646 HDHD2Q9H0R4 259 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 MS4A6AQ9H2W1 248 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 C16orf95Q9H693 158 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 TUBA4BQ9H853 241 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 PSMD13Q9UNM6 376 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 HDGFL3Q9Y3E1 203 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 HEY1Q9Y5J3 304 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ATP6V1DQ9Y5K8 247 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 ALG5Q9Y673 324 aa0.9□□□□□ -2.26
VPS13A-206ENST00000376646 PTPRJQ12913 1337 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 NPATQ14207 1427 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 F5H768 121 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 STX10O60499 249 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 LY6HO94772 140 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 HIST1H1CP16403 213 aaKnown RBP0.9□□□□□ -2.27
VPS13A-206ENST00000376646 CXCL2P19875 107 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 MIPP30301 263 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 FUSP35637 526 aaKnown RBP eCLIP0.9□□□□□ -2.27
VPS13A-206ENST00000376646 CDK9P50750 372 aaKnown RBP0.9□□□□□ -2.27
VPS13A-206ENST00000376646 RPL14P50914 215 aaKnown RBP0.9□□□□□ -2.27
VPS13A-206ENST00000376646 HPCAP84074 193 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 COTL1Q14019 142 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 TMEM31Q5JXX7 168 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 LCN8Q6JVE9 175 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 DNM1P34Q6PK57 102 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 TCF24Q7RTU0 167 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 OR4K13Q8NH42 304 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 OR10D3Q8NH80 312 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 SMIM19Q96E16 107 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 OR7D2Q96RA2 312 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 MGLLQ99685 303 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 GNB1LQ9BYB4 327 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 SLC22A4Q9H015 551 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 DRC3Q9H069 523 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 NSRP1Q9H0G5 558 aaKnown RBP0.9□□□□□ -2.27
VPS13A-206ENST00000376646 PLEKHJ1Q9NW61 149 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 SNX12Q9UMY4 172 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 ZNF337Q9Y3M9 751 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 MINOS1-NBL1R4GNA1 71 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 TRPM6Q9BX84 2022 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 COL6A3P12111 3177 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 KMT2EQ8IZD2 1858 aa0.9□□□□□ -2.27
VPS13A-206ENST00000376646 DSCAML1Q8TD84 2053 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 MYO16Q9Y6X6 1858 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 C19orf71A6NCJ1 209 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 IGLV3-27P01718 113 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 IGHV3-30-3P0DP02 117 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 SLC25A16P16260 332 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 IFNGR2P38484 337 aa0.89□□□□□ -2.27
VPS13A-206ENST00000376646 LPAR6P43657 344 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms