RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 BUB1B-PAK6H3BSN5 160 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 CD3DP04234 171 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 IFNA4P05014 189 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 REG1BP48304 166 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 AANATQ16613 207 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 NAA60Q9H7X0 242 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 CFPP27918 469 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 SLC9A3R2Q15599 337 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 ECSCRQ19T08 205 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 THNSL2Q86YJ6 484 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 ZNF649Q9BS31 505 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 ELOVL1Q9BW60 279 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 BORCS7-ASMTA0A0B4J1R7 106 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 FAM157AC9JC47 383 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 SC5DO75845 299 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 FOXL1Q12952 345 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 H1FOOQ8IZA3 346 aaPredicted RBP7.58□□□□□ -1.2
UPF2-202ENST00000357604 ZNF485Q8NCK3 441 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.58□□□□□ -1.2
UPF2-202ENST00000357604 RNF224P0DH78 156 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 ZNF273Q14593 569 aa7.58□□□□□ -1.2
UPF2-202ENST00000357604 A0A0G2JLM5 398 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 ANKRD34BA5PLL1 514 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 NBR2O15453 112 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 IGHV3-7P01780 117 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 CD1BP29016 333 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 CCR6P51684 374 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 EFNB2P52799 333 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 UNC119Q13432 240 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 MORN2Q502X0 79 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 Q56UQ5 140 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 DRAM1Q8N682 238 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 MAB21L2Q9Y586 359 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 IGKV1-12A0A0C4DH73 117 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 MEX3AA1L020 520 aaKnown RBP7.57□□□□□ -1.2
UPF2-202ENST00000357604 GOSR2O14653 212 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 SAA4P35542 130 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 Q71RC1 249 aaPredicted RBP7.57□□□□□ -1.2
UPF2-202ENST00000357604 LINC00311Q8N616 119 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 C11orf54Q9H0W9 315 aaPredicted RBP7.57□□□□□ -1.2
UPF2-202ENST00000357604 DNAH12Q6ZR08 3092 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 ACACAQ13085 2346 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 SCTP09683 121 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 UCP3P55916 312 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 HBG1P69891 147 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 HBG2P69892 147 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
UPF2-202ENST00000357604 C22orf34Q6ZV56 151 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 OR13C8Q8NGS7 320 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 ABHD1Q96SE0 405 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 CABLES2Q9BTV7 478 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 C20orf85Q9H1P6 137 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 TRAV39A0A0B4J263 110 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 ANKRD20A5PA0PJZ0 165 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 ATP5G2Q06055 141 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 TMEM268Q5VZI3 342 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 UNQ5815/PRO19632Q6UWF5 114 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 TBC1D26Q86UD7 250 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 C11orf53Q8IXP5 236 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 MOB3AQ96BX8 217 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 HDHD3Q9BSH5 251 aaPredicted RBP7.57□□□□□ -1.2
UPF2-202ENST00000357604 DOCK10Q96BY6 2186 aa7.57□□□□□ -1.2
UPF2-202ENST00000357604 A0A1W2PP11 408 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 VSIG10L2P0DP72 767 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 RPL15P61313 204 aaKnown RBP7.56□□□□□ -1.2
UPF2-202ENST00000357604 GAPTQ8N292 157 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 NUDT15Q9NV35 164 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 IL36RNQ9UBH0 155 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 A0A1B0GWJ7 208 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 NPIPB11E5RHQ5 1161 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 AP4M1O00189 453 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 CORTO00230 105 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 OR2F2O95006 317 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 KLRD1Q13241 179 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 GRPEL2Q8TAA5 225 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 H0Y980 276 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 RAB27BO00194 218 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 MELTFP08582 738 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 TRAPPC2P0DI81 140 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 TRAPPC2BP0DI82 140 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 OR4C16Q8NGL9 310 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 CCL28Q9NRJ3 127 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 TMED3Q9Y3Q3 217 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 VWC2LB2RUY7 222 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 IL7P13232 177 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 RPL27AP46776 148 aaKnown RBP7.56□□□□□ -1.2
UPF2-202ENST00000357604 RIPPLY3P57055 190 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 AKR1C1Q04828 323 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 TMEM128Q5BJH2 165 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 Q6ZS49 121 aa7.56□□□□□ -1.2
UPF2-202ENST00000357604 ASB13Q8WXK3 278 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms