RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 SRFP11831 508 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 RAB7AP51149 207 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 HBG1P69891 147 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 HBG2P69892 147 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 PINX1Q96BK5 328 aaKnown RBP12.94□□□□□ -0.34
SNX18-202ENST00000343017 SGCZQ96LD1 299 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 FAM103A1Q9BTL3 118 aaKnown RBP12.94□□□□□ -0.34
SNX18-202ENST00000343017 REPIN1Q9BWE0 567 aaKnown RBP12.94□□□□□ -0.34
SNX18-202ENST00000343017 OR1A1Q9P1Q5 309 aa12.94□□□□□ -0.34
SNX18-202ENST00000343017 CBLN1P23435 193 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 COL8A2P25067 703 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 MSX1P28360 303 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 SERF1AO75920 110 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 NDUFB4O95168 129 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 CLDN1O95832 211 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 THBS3P49746 956 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 PPP1CBP62140 327 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 RPP30P78346 268 aaKnown RBP12.93□□□□□ -0.34
SNX18-202ENST00000343017 PSG4Q00888 419 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 TFF3Q07654 80 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 RNPS1Q15287 305 aaKnown RBP12.93□□□□□ -0.34
SNX18-202ENST00000343017 LINC01551Q86U37 167 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 FGF23Q9GZV9 251 aaPredicted RBP12.93□□□□□ -0.34
SNX18-202ENST00000343017 COL5A1P20908 1838 aaPredicted RBP12.93□□□□□ -0.34
SNX18-202ENST00000343017 hCG_38984A0A1B0GV85 526 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 RBFOX2O43251 390 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX18-202ENST00000343017 TIAF1O95411 115 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 UMODP07911 640 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 WNT2P09544 360 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 CCNOP22674 350 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 CHRNB4P30926 498 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 ATP5G3P48201 142 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 GPM6AP51674 278 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 NEIL1Q96FI4 390 aaPredicted RBP12.93□□□□□ -0.34
SNX18-202ENST00000343017 VAMP8Q9BV40 100 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 ZDHHC11Q9H8X9 412 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 ASCL3Q9NQ33 180 aa12.93□□□□□ -0.34
SNX18-202ENST00000343017 IGHV1OR15-9A0A0B4J2B8 117 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 CCL2P13500 99 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 SOX8P57073 446 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 GCSAMLQ5JQS6 135 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 FFAR4Q5NUL3 377 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 TNFSF11O14788 317 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 CELA2AP08217 269 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 GNB1P62873 340 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 NUFIP2Q7Z417 695 aaKnown RBP12.92□□□□□ -0.34
SNX18-202ENST00000343017 STPG4Q8N801 248 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 HLA-CQ95604 372 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 IL36GQ9NZH8 169 aa12.92□□□□□ -0.34
SNX18-202ENST00000343017 IGHV3-9P01782 118 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 OR51B6Q9H340 312 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 TMEM9BQ9NQ34 198 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 CACNA1DQ01668 2161 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
SNX18-202ENST00000343017 RHBDD2Q6NTF9 364 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 TMEM144Q7Z5S9 345 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 ZNF709Q8N972 641 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 MTCH1Q9NZJ7 389 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 RBM7Q9Y580 266 aaKnown RBP12.91□□□□□ -0.34
SNX18-202ENST00000343017 ATP23Q9Y6H3 246 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 IGHV1OR21-1A0A087WYE8 117 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 TRAV34A0A0B4J273 112 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 CTXND1A0A1B0GTU2 59 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 ZNF585BQ52M93 769 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 FBXW9Q5XUX1 488 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 OR1L1Q8NH94 360 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 ELOVL5Q9NYP7 299 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 CLN8Q9UBY8 286 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 OR2W1Q9Y3N9 320 aa12.91□□□□□ -0.34
SNX18-202ENST00000343017 GPR179Q6PRD1 2367 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 AQP7O14520 342 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 WDR1O75083 606 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 CRYABP02511 175 aaKnown RBP12.9□□□□□ -0.34
SNX18-202ENST00000343017 CLDN23Q96B33 292 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 SRXN1Q9BYN0 137 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
SNX18-202ENST00000343017 RYDENQ9NUL5 291 aaKnown RBP12.9□□□□□ -0.34
SNX18-202ENST00000343017 FAM186AA6NE01 2351 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 SYNGR1O43759 233 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 KRTDAPP60985 99 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 LCN2P80188 198 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 RNF138Q8WVD3 245 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
SNX18-202ENST00000343017 KCNS2Q9ULS6 477 aa12.9□□□□□ -0.34
SNX18-202ENST00000343017 USF3Q68DE3 2245 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms