RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MOGAT3Q86VF5 341 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PRELID3AQ96N28 172 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM30AQ9NV96 361 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 KLK13Q9UKR3 277 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CES1P1Q9UKY3 287 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 SYNGR1O43759 233 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 HLA-DQB1P01920 261 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 MPLP40238 635 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 THSD4Q6ZMP0 1018 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 LINC01555Q8NAE3 123 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TP53I13Q8NBR0 393 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CADM4Q8NFZ8 388 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 DNAJC4Q9NNZ3 241 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 FLRT3Q9NZU0 649 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 RCC2Q9P258 522 aaKnown RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 HOXB3P14651 431 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PNLIPP16233 465 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF770Q6IQ21 691 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 NTN1O95631 604 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 KLRB1Q12918 225 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 SSPNQ14714 243 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ISXQ2M1V0 245 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM196Q5HYL7 178 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TIMP4Q99727 224 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TNFSF18Q9UNG2 199 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TDRD15B5MCY1 1934 aaKnown RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ABCA1O95477 2261 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 A0A1B0GU03 582 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 SP9P0CG40 484 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 MAGEA5P43359 124 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 SKP2Q13309 424 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 IL11RAQ14626 422 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 GAB4Q2WGN9 574 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 MSRB3Q8IXL7 192 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ESPL1Q14674 2120 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TRAV39A0A0B4J263 110 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 C9orf172C9J069 976 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 HERPUD1Q15011 391 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ZFAND6Q6FIF0 208 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 TNFRSF14Q92956 283 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 GSN-AS1Q9NRJ2 163 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 KCNE5Q9UJ90 142 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CTSVO60911 334 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PRSS8Q16651 343 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ZBTB34Q8NCN2 500 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 FAM131CQ96AQ9 280 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 IGKV3D-15A0A087WSY6 115 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 IGKV3-15P01624 115 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 Q6AWC8 147 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 GPBAR1Q8TDU6 330 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ZG16BQ96DA0 208 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 C5orf30Q96GV9 206 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 NMBP08949 121 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CT62P0C5K7 136 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 CYB561D1Q8N8Q1 229 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 RAB1CQ92928 201 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 F11RQ9Y624 299 aaKnown RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 MAS1LP35410 378 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SOX8P57073 446 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TRAV17A0A0B4J275 112 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 CDIPTO14735 213 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 AMY1AP04745 511 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SNRPCP09234 159 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TRA2AQ13595 282 aaKnown RBP eCLIP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR9G4Q8NGQ1 327 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 NUDT11Q96G61 164 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 GGACTQ9BVM4 153 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 CISD1Q9NZ45 108 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 RNF7Q9UBF6 113 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 INSIG2Q9Y5U4 225 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 FXYD1O00168 92 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 CA11O75493 328 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 RIPPLY3P57055 190 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ROM1Q03395 351 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 COL10A1Q03692 680 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 MRPL30Q8TCC3 161 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 A0A1W2PPE3 182 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 CIRBPQ14011 172 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 HSPB9Q9BQS6 159 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 GHITMQ9H3K2 345 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF665Q9H7R5 613 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 RAXQ9Y2V3 346 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 R4GN57 208 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 PDCD11Q14690 1871 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 ERGP11308 486 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SPEM2Q0P670 501 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 C19orf54Q5BKX5 351 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 LINC01465Q8N7H1 131 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 NUDT10Q8NFP7 164 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TUBA4BQ9H853 241 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 JKAMPQ9P055 326 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 SERGEFQ9UGK8 458 aa4.85□□□□□ -1.63
CPSF2-201ENST00000298875 HEATR1Q9H583 2144 aaKnown RBP4.85□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms