RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 ATG12O94817 140 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 IGKV1-39P01597 117 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 IGKV1D-39P04432 117 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 NPBWR1P48145 328 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 GNG10P50151 68 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 OR2B8PP59922 312 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 PRB3Q04118 309 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF146Q15072 292 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MST1LQ2TV78 715 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 UTF1Q5T230 341 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 SPACA3Q8IXA5 215 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MRPL37Q9BZE1 423 aaKnown RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MBD3L4A6NDZ8 208 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MBD3L3A6NE82 208 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MBD3L5A6NJ08 208 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 C17orf98A8MV24 154 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 FGF16O43320 207 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 S1PR2O95136 353 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 CGAP01215 116 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 SNRNP70P08621 437 aaKnown RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 PTAFRP25105 342 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 P2RY1P47900 373 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 RTP5Q14D33 572 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 GUSBP1Q15486 140 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 NMSQ5H8A3 153 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 LINC00596Q86U02 117 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MBD3L2Q8NHZ7 208 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 TMEM56Q96MV1 263 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 CCL13Q99616 98 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 SLX1AQ9BQ83 275 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 COL25A1Q9BXS0 654 aaPredicted RBP5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 MMP26Q9NRE1 261 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 CLN8Q9UBY8 286 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 WIPI2Q9Y4P8 454 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 TMEM56-RWDD3S4R434 201 aa5.07□□□□□ -1.6
TNFSF4-201ENST00000281834 TMEM210A6NLX4 147 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 PLXNB1O43157 2135 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SPINT2O43291 252 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 FCGR3BO75015 233 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 IGKV1-5P01602 117 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 GYPAP02724 150 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 LYL1P12980 280 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 NDUFB7P17568 137 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SULT1A2P50226 295 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 TNFAIP6P98066 277 aaPredicted RBP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 RPL39P5Q59GN2 51 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 LCN15Q6UWW0 184 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 DOLPP1Q86YN1 238 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SVBPQ8N300 66 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 GCSAMQ8N6F7 178 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 LRTM2Q8N967 370 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CCL17Q92583 94 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 KCNJ16Q9NPI9 418 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 C19orf12Q9NSK7 152 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 MED9Q9NWA0 146 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 PSENENQ9NZ42 101 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNRD1Q9P1U0 126 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CSMD1Q96PZ7 3565 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 IGKV1D-17A0A075B6S4 117 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 A0A0G2JNJ9 132 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CEBPZOSA8MTT3 80 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 M0R1X1 148 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 TMPRSS2O15393 492 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SYNGR2O43760 224 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 IFNA17P01571 189 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 OPN1MWP04001 364 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CD55P08174 381 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 FBP1P09467 338 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 OPN1MW2P0DN77 364 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 OPN1MW3P0DN78 364 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 DEFA4P12838 97 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 MDH2P40926 338 aaKnown RBP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 FGF8P55075 233 aaPredicted RBP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 F2RL1P55085 397 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 RPL23AP62750 156 aaKnown RBP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CCL20P78556 96 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 AKR1C8PQ5T2L2 129 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 GPR157Q5UAW9 335 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 FAM216BQ8N7L0 139 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 UBAC2Q8NBM4 344 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 OR5D13Q8NGL4 314 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 ZDHHC16Q969W1 377 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 RARRES2Q99969 163 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SLC25A31Q9H0C2 315 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 ZFP57Q9NU63 452 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 Q9UFV3 132 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 PUS1Q9Y606 427 aaKnown RBP eCLIP5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 PTPRBP23467 1997 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 UBE2L5PA0A1B0GUS4 154 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 SMCO3A2RU48 225 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 OOEPA6NGQ2 149 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 CEACAM4O75871 244 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 IFNA5P01569 189 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 IGLV2-14P01704 120 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 GPR12P47775 334 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF266Q14584 549 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF585BQ52M93 769 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 TIMM23BQ5SRD1 257 aa5.06□□□□□ -1.6
TNFSF4-201ENST00000281834 MOB1BQ7L9L4 216 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms