RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RTL8AQ9BWD3 113 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 POLDIP2Q9Y2S7 368 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 OR2W1Q9Y3N9 320 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 AHCTF1Q8WYP5 2266 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 USP34Q70CQ2 3546 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 TRGV5A0A0B4J1U4 118 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 TRAV24A0A0B4J272 114 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 IGKV1D-13A0A0B4J2D9 117 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 IGSF23A1L1A6 192 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 C9JQL5 133 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 CDX4O14627 284 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ADAM20O43506 726 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 NCOR1O75376 2440 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 PGLYRP1O75594 196 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 DFFBO76075 338 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 PRH1P02810 166 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ACAA1P09110 424 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 IGKV1-13P0DP09 117 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 CCL2P13500 99 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 CEACAM1P13688 526 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 CD200P41217 278 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 HOXA1P49639 335 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 RAB13P51153 203 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 POLR2GP62487 172 aaKnown RBP eCLIP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 NHLH1Q02575 133 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF616Q08AN1 781 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 TSC22D1Q15714 1073 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 GABRA6Q16445 453 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 TBC1D28Q2M2D7 210 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 RNF212Q495C1 297 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 TMEM178AQ8NBL3 297 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 OR10J5Q8NHC4 309 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 GMPPAQ96IJ6 420 aaPredicted RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 RAB40CQ96S21 281 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ADAT1Q9BUB4 502 aaKnown RBP6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ZDHHC11Q9H8X9 412 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 BIN3Q9NQY0 253 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 CCL28Q9NRJ3 127 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 WDR87Q6ZQQ6 2873 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 ARID1AO14497 2285 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 FREM1Q5H8C1 2179 aa6.6□□□□□ -1.35
CXCR4-201ENST00000241393 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
CXCR4-201ENST00000241393 M0R296 226 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 WRBO00258 174 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 AGPAT2O15120 278 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 SELEP16581 610 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 CD82P27701 267 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 PPT1P50897 306 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 ERVK11-1P61568 191 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 RPP30P78346 268 aaKnown RBP6.59□□□□□ -1.35
CXCR4-201ENST00000241393 TGFBR3Q03167 851 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 FOXF2Q12947 444 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 RHEBQ15382 184 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 Q6P435 159 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 MDP1Q86V88 176 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 HSD17B11Q8NBQ5 300 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 PLPPR1Q8TBJ4 325 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 IL36RNQ9UBH0 155 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 IL17BQ9UHF5 180 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 RNF115Q9Y4L5 304 aa6.59□□□□□ -1.35
CXCR4-201ENST00000241393 MEX3AA1L020 520 aaKnown RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM210A6NLX4 147 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 COLCA2A8K830 154 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 PROB1E7EW31 1015 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 HSD17B6O14756 317 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 SSSCA1O60232 199 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TNFSF15O95150 251 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 HBE1P02100 147 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 IFNA4P05014 189 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 SERPINE2P07093 398 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF14P17017 642 aaPredicted RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TUBG1P23258 451 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ATP6V0CP27449 155 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF146Q15072 292 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ACSF3Q4G176 576 aaPredicted RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 HIKESHIQ53FT3 197 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 CXorf66Q5JRM2 361 aaPredicted RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF497Q6ZNH5 498 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 LINC00518Q8N0U6 118 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 OR10V1Q8NGI7 309 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 OR1J1Q8NGS3 322 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 OR2G3Q8NGZ4 309 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 RXFP4Q8TDU9 374 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 KRTAP9-4Q9BYQ2 154 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 EIF5A2Q9GZV4 153 aaKnown RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 SH3BGRL3Q9H299 93 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 KCNJ16Q9NPI9 418 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TUBG2Q9NRH3 451 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 KIAA1456Q9P272 454 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 WIPI2Q9Y4P8 454 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 WSB1Q9Y6I7 421 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 IQCF6A8MYZ5 107 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms