RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 OR51V1Q9H2C8 321 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 C8orf4Q9NR00 106 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 KCNIP2Q9NS61 270 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 IMP3Q9NV31 184 aaKnown RBP2.43□□□□□ -2.02
CPNE3-213ENST00000622183 SLC23A2Q9UGH3 650 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 WDR7Q9Y4E6 1490 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 CLUHO75153 1309 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 KIAA1107Q9UPP5 1409 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 RIMS1Q86UR5 1692 aaKnown RBP2.42□□□□□ -2.02
CPNE3-213ENST00000622183 ADCY9O60503 1353 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 KLRC4-KLRK1H3BQV0 150 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 H3BSA7 217 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 SMIM24O75264 130 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 ADAP1O75689 374 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 NSA2O95478 260 aaKnown RBP2.42□□□□□ -2.02
CPNE3-213ENST00000622183 ATP6V1G2O95670 118 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 IL6P05231 212 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 RPS17P08708 135 aaKnown RBP2.42□□□□□ -2.02
CPNE3-213ENST00000622183 FBP1P09467 338 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 CD40LGP29965 261 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 AGTR1P30556 359 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 LRRC26Q2I0M4 334 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 TBC1D28Q2M2D7 210 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 LRP11Q86VZ4 500 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 PLCZ1Q86YW0 608 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 FUNDC1Q8IVP5 155 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 C10orf67Q8IYJ2 551 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 LY6G5BQ8NDX9 201 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 HIST1H2BAQ96A08 127 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 DERL2Q9GZP9 239 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 METTL9Q9H1A3 318 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 UBQLN4Q9NRR5 601 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.42□□□□□ -2.02
CPNE3-213ENST00000622183 ERICH3Q5RHP9 1530 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 CNTLNQ9NXG0 1405 aa2.42□□□□□ -2.02
CPNE3-213ENST00000622183 ZNF518AQ6AHZ1 1483 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 KIF24Q5T7B8 1368 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 UQCRHLA0A096LP55 91 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 IGKV3D-11A0A0A0MRZ8 115 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 DAPL1A0PJW8 107 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 B4DEV8 164 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 CCRL2O00421 344 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 LECT2O14960 151 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 EEF1E1O43324 174 aaKnown RBP2.41□□□□□ -2.02
CPNE3-213ENST00000622183 DENRO43583 198 aaKnown RBP2.41□□□□□ -2.02
CPNE3-213ENST00000622183 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 UQCRHP07919 91 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 CBR1P16152 277 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 PSMA1P25786 263 aaKnown RBP2.41□□□□□ -2.02
CPNE3-213ENST00000622183 GRPRP30550 384 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 SULT1A2P50226 295 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 GABARAPL2P60520 117 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 APOFQ13790 326 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 C1DQ13901 141 aaKnown RBP2.41□□□□□ -2.02
CPNE3-213ENST00000622183 DNAL1Q4LDG9 190 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 TMEM31Q5JXX7 168 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 DRAM2Q6UX65 266 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 HS3ST5Q8IZT8 346 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 YIPF7Q8N8F6 280 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 OR8J2Q8NGG1 315 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 TNFAIP8L1Q8WVP5 186 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 GTSF1LQ9H1H1 148 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 C11orf49Q9H6J7 331 aa2.41□□□□□ -2.02
CPNE3-213ENST00000622183 MCTS1Q9ULC4 181 aaKnown RBP2.41□□□□□ -2.02
CPNE3-213ENST00000622183 THOC2Q8NI27 1593 aaKnown RBP2.4□□□□□ -2.02
CPNE3-213ENST00000622183 CCNB3Q8WWL7 1395 aa2.4□□□□□ -2.02
CPNE3-213ENST00000622183 WDR97A6NE52 1622 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 MIF4GDA9UHW6 222 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 F5H5T6 163 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 PSCAO43653 123 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 ATP5HO75947 161 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 RPP14O95059 124 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 IFNA14P01570 189 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 HIST1H1CP16403 213 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 ADORA1P30542 326 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 PPP1R2P41236 205 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 RPL14P50914 215 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 EMP2P54851 167 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 OR8G1Q15617 311 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 C4orf26Q17RF5 130 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 PPP1R2P3Q6NXS1 205 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 DOLPP1Q86YN1 238 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 MUC7Q8TAX7 377 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 OR5P3Q8WZ94 311 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 EBNA1BP2Q99848 306 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 SELENOSQ9BQE4 189 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 HIGD2AQ9BW72 106 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 ARMC1Q9NVT9 282 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 GLS2Q9UI32 602 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 PSMD13Q9UNM6 376 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 TP53TG1Q9Y2A0 90 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 SAMHD1Q9Y3Z3 626 aaKnown RBP2.4□□□□□ -2.03
CPNE3-213ENST00000622183 MTCH2Q9Y6C9 303 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 SOGA1O94964 1423 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 MIA3Q5JRA6 1907 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 RB1CC1Q8TDY2 1594 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms