RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MSX1P28360 303 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
MSH6-214ENST00000616033 PNRC1Q12796 327 aaPredicted RBP11.26□□□□□ -0.61
MSH6-214ENST00000616033 IL24Q13007 206 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 MCEMP1Q8IX19 187 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 LRTM2Q8N967 370 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 OR2M3Q8NG83 312 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 NXPH2O95156 264 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 IFNA1P01562 189 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 RBM11P57052 281 aaKnown RBP11.26□□□□□ -0.61
MSH6-214ENST00000616033 RIPPLY3P57055 190 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 ARF1P84077 181 aaKnown RBP11.26□□□□□ -0.61
MSH6-214ENST00000616033 PLXDC1Q8IUK5 500 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 SPSB1Q96BD6 273 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 NAT8Q9UHE5 227 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
MSH6-214ENST00000616033 DUX1O43812 170 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 RBX1P62877 108 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 BAXQ07812 192 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 TSTD1Q8NFU3 115 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 POLR3KQ9Y2Y1 108 aaPredicted RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 PGLYRP1O75594 196 aaPredicted RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 KRASP01116 189 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 PSMB3P49720 205 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 THBS3P49746 956 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 HINT1P49773 126 aaPredicted RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 SRPXP78539 464 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 MEF2BQ02080 365 aaPredicted RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 ID3Q02535 119 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 OR2V1Q8NHB1 315 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 RASL10BQ96S79 203 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 DECR2Q9NUI1 292 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 SYNGR2O43760 224 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 SMPD2O60906 423 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 ZFAND5O76080 213 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 IGKV1D-33P01593 117 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 IGKV1-33P01594 117 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 CD81P60033 236 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 SRYQ05066 204 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 DCAF10Q5QP82 559 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 LEMD1Q68G75 181 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 LHFPL2Q6ZUX7 228 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.25□□□□□ -0.61
MSH6-214ENST00000616033 OR1A1Q9P1Q5 309 aa11.25□□□□□ -0.61
MSH6-214ENST00000616033 GYPAP02724 150 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 ZNF808Q8N4W9 903 aaPredicted RBP11.24□□□□□ -0.61
MSH6-214ENST00000616033 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 OR56B2PQ8NGI1 322 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 CRIM1Q9NZV1 1036 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 TP53I11O14683 189 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 CCL25O15444 150 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 SCRG1O75711 98 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 COL8A2P25067 703 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 GCH1P30793 250 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
MSH6-214ENST00000616033 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 TXN2Q99757 166 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 CDH20Q9HBT6 801 aa11.24□□□□□ -0.61
MSH6-214ENST00000616033 CLEC18AA5D8T8 446 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 LILRA5A6NI73 299 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 S100GP29377 79 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 DUSP3P51452 185 aaPredicted RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 RND2P52198 227 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 C20orf204Q6ZNR8 217 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 MRGPRGQ86SM5 289 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 CLEC18CQ8NCF0 446 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 OR5L2Q8NGL0 311 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 ZPBPQ9BS86 351 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 SIRPB1O00241 398 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 CCL3P10147 92 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 PSG4Q00888 419 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 ZNF816Q0VGE8 651 aaPredicted RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 VAMP3Q15836 100 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 CLN8Q9UBY8 286 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 IGKV1-6A0A0C4DH72 117 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms