RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 FGF13Q92913 245 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 TMIGD2Q96BF3 282 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 PPWD1Q96BP3 646 aaKnown RBP0.45□□□□□ -2.34
ITGB5-213ENST00000608945 ABHD14BQ96IU4 210 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 UPK3BQ9BT76 320 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 ZNF471Q9BX82 626 aaPredicted RBP0.45□□□□□ -2.34
ITGB5-213ENST00000608945 GTSF1LQ9H1H1 148 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 OR51E2Q9H255 320 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 LINC00527Q9UJ94 153 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 DENND4BO75064 1496 aaPredicted RBP0.45□□□□□ -2.34
ITGB5-213ENST00000608945 BRCA1P38398 1863 aaKnown RBP0.45□□□□□ -2.34
ITGB5-213ENST00000608945 TNIKQ9UKE5 1360 aa0.45□□□□□ -2.34
ITGB5-213ENST00000608945 PLXNB3Q9ULL4 1909 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 MEIKINA0A087WXM9 373 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 IGKV3D-7A0A0C4DH55 119 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 IGKV3OR2-268A0A0C4DH90 116 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 EFCAB9A8MZ26 197 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 PHYHO14832 338 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 UBE2L6O14933 153 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 POLR3GO15318 223 aaPredicted RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 EPPINO95925 133 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 NQO2P16083 231 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 ORM2P19652 201 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 NPPCP23582 126 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 OR1E2P47887 323 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 PSMB3P49720 205 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 RPL14P50914 215 aaKnown RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 AQP5P55064 265 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 CTBP2P56545 445 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TAS2R45P59539 299 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 ACTBP60709 375 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TMEM258P61165 79 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 DYNLL1P63167 89 aaKnown RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 ACTG1P63261 375 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TNNC1P63316 161 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 GLO1Q04760 184 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TPRXLQ17RH7 258 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TRMT12Q53H54 448 aaKnown RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 AHSA2Q719I0 299 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 SLC35E3Q7Z769 313 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 RPS19BP1Q86WX3 136 aaKnown RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 DOLPP1Q86YN1 238 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 ST13P4Q8IZP2 240 aaPredicted RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 OR51H1Q8NH63 302 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 SUN5Q8TC36 379 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 TMEM239Q8WW34 195 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 BCL7BQ9BQE9 202 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 ACBD6Q9BR61 282 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 HINT2Q9BX68 163 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 C11orf1Q9H5F2 150 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 MRPS16Q9Y3D3 137 aaKnown RBP0.44□□□□□ -2.34
ITGB5-213ENST00000608945 SHANK3Q9BYB0 1731 aa0.44□□□□□ -2.34
ITGB5-213ENST00000608945 COL4A1P02462 1669 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 ADAMTS7Q9UKP4 1686 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 IGKV3-7A0A075B6H7 116 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 A0A1B0GW15 77 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 RFPL4AA6NLU0 287 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 RFPL4AL1F8VTS6 287 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 M0QYV0 167 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 LIN7AO14910 233 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 PSMG1O95456 288 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 LDOC1O95751 146 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 IGHV1-69P01742 117 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CD7P09564 240 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 ZNF705DP0CH99 300 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 ZNF705BP0CI00 300 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CDK2P24941 298 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CCR7P32248 378 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 OPRM1P35372 400 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 KRTAP10-4P60372 401 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 GNA12Q03113 381 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 SLC38A11Q08AI6 406 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 AMTNQ6UX39 209 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 LRRC28Q86X40 367 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CCDC112Q8NEF3 446 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 TRNT1Q96Q11 434 aaKnown RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 TBX5Q99593 518 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 RETNLBQ9BQ08 111 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 NKX6-2Q9C056 277 aaPredicted RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CHST5Q9GZS9 411 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 EIF5A2Q9GZV4 153 aaKnown RBP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 RAB1BQ9H0U4 201 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 MED28Q9H204 178 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 C16orf95Q9H693 158 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 NRBP2Q9NSY0 501 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 CLEC2DQ9UHP7 191 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 GLS2Q9UI32 602 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 HHLA2Q9UM44 414 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 SNX24Q9Y343 169 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.43□□□□□ -2.34
ITGB5-213ENST00000608945 FAM215AQ9Y5M1 114 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 SNX10Q9Y5X0 201 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 RAB3GAP2Q9H2M9 1393 aa0.43□□□□□ -2.34
ITGB5-213ENST00000608945 STRCP1A6NGW2 1772 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 ZNF532Q9HCE3 1301 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 TMSB15BA0A087X1C1 80 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 IGKV2D-26A0A0A0MRZ7 120 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 TRGV5A0A0B4J1U4 118 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 A0A1W2PQD3 144 aa0.42□□□□□ -2.34
ITGB5-213ENST00000608945 OR5K4A6NMS3 321 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms