RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 RAB22AQ9UL26 194 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 TSSC4Q9Y5U2 329 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 A0A0A6YYD4 124 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 IFITM5A6NNB3 132 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 NCBP2LA6PVI3 153 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 RAB3BP20337 219 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 GADD45AP24522 165 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 PSMB9P28065 219 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 PPP1CCP36873 323 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 SLC35B1P78383 322 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 DEFA6Q01524 100 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 C2orf76Q3KRA6 126 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 SLC35E3Q7Z769 313 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 OR52L2PQ8NGH6 319 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 IL1F10Q8WWZ1 152 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 EDARADDQ8WWZ3 215 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 GON7Q9BXV9 100 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 PIPOXQ9P0Z9 390 aa14.08□□□□□ -0.16
SHKBP1-204ENST00000594862 IGHV3-72A0A0B4J1Y9 119 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 TCRBV4S1A1TA0A5B7 111 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 PSMB11A5LHX3 300 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 FOXI3A8MTJ6 420 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 SERPINE3A8MV23 424 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 ITGB1BP1O14713 200 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 LDLRAD4O15165 306 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 SOCS1O15524 211 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 IGHG2P01859 326 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 RAB6AP20340 208 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 FGF9P31371 208 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 VEGFCP49767 419 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 CLDN12P56749 244 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 LSAMPQ13449 338 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 GNMTQ14749 295 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 ARL6IP1Q15041 203 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 HES5Q5TA89 166 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 ZNF773Q6PK81 442 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 PTX4Q96A99 478 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 AK3Q9UIJ7 227 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 NOTCH1P46531 2555 aa14.07□□□□□ -0.16
SHKBP1-204ENST00000594862 METTL21EPA6NDL7 271 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 SH2D7A6NKC9 451 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 ADARB2-AS1A8MUL3 147 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 AP4M1O00189 453 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 PF4V1P10720 104 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 ZBTB25P24278 435 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 SLC6A1P30531 599 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 PDLIM3Q53GG5 364 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 FAM53AQ6NSI3 398 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 ARHGAP5-AS1Q96IT6 56 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 S1PR3Q99500 378 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 CMSS1Q9BQ75 279 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 CENPOQ9BU64 300 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 PECRQ9BY49 303 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 ABCG5Q9H222 651 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 SLC23A1Q9UHI7 598 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 STUB1Q9UNE7 303 aa14.06□□□□□ -0.16
SHKBP1-204ENST00000594862 TMEM272A0A1B0GTI8 110 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 RAB29O14966 203 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 HSPA12AO43301 675 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 CD3GP09693 182 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 SERPINB10P48595 397 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 C22orf42Q6IC83 251 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 TPRA1Q86W33 373 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 Q8N9W7 124 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 RAB3CQ96E17 227 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 Q9N2K0 584 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 SSR3Q9UNL2 185 aa14.05□□□□□ -0.16
SHKBP1-204ENST00000594862 PRKDCP78527 4128 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 SAA2-SAA4A0A096LPE2 208 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 SAA2P0DJI9 122 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 GPR12P47775 334 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 TMEM50BP56557 158 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 OR10A3P58181 314 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 KIR2DS1Q14954 304 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 KCTD21Q4G0X4 260 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 KHDC1LQ5JSQ8 128 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 IFI27L2Q9H2X8 130 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 ZNF580Q9UK33 172 aa14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 RRP15Q9Y3B9 282 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-204ENST00000594862 NOTOA8MTQ0 251 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 SCGNO76038 276 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 DIRAS3O95661 229 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 PF4P02776 101 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 SOX6P35712 828 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 TCTEX1D4Q5JR98 221 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 ODF3L1Q8IXM7 274 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 STPG2Q8N412 459 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 FAM71E2Q8N5Q1 922 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 OR10R2Q8NGX6 335 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 PHF21AQ96BD5 680 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 NABP2Q9BQ15 211 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 ZFP57Q9NU63 452 aa14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 TXNL4BQ9NX01 149 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-204ENST00000594862 A0A1W2PRX2 142 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 SHISA3A0PJX4 238 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms