RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SMAD7O15105 426 aaKnown RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 SHOXO15266 292 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 OR5AC1P0C628 307 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L2P0CJ85 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L3P0CJ86 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L4P0CJ87 422 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L5P0CJ88 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L6P0CJ89 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L7P0CJ90 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 KIR2DS4P43632 304 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 KIR2DS1Q14954 304 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 HERPUD1Q15011 391 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 HFEQ30201 348 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 KRBOX4Q5JUW0 171 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SLC35E4Q6ICL7 350 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4L9Q6RFH8 374 aaPredicted RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 MOB1BQ7L9L4 216 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 ZNF561Q8N587 486 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 TPRX1Q8N7U7 411 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 MOB3AQ96BX8 217 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SDSLQ96GA7 329 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SNX22Q96L94 193 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 GAFA1Q96PS6 74 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 NAA60Q9H7X0 242 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 MBNL3Q9NUK0 354 aaKnown RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 DUX4Q9UBX2 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 KCNIP3Q9Y2W7 256 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 VPS13CQ709C8 3753 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 PPIAL4EA0A075B759 164 aa11□□□□□ -0.65
VRK3-205ENST00000593919 PPIAL4DF5H284 164 aa11□□□□□ -0.65
VRK3-205ENST00000593919 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
VRK3-205ENST00000593919 K7N7A8 449 aa11□□□□□ -0.65
VRK3-205ENST00000593919 SCO1O75880 301 aa11□□□□□ -0.65
VRK3-205ENST00000593919 GOSR1O95249 250 aa11□□□□□ -0.65
VRK3-205ENST00000593919 IFNA21P01568 189 aa11□□□□□ -0.65
VRK3-205ENST00000593919 PET100P0DJ07 73 aa11□□□□□ -0.65
VRK3-205ENST00000593919 PPIAL4FP0DN26 164 aa11□□□□□ -0.65
VRK3-205ENST00000593919 LYNX1P0DP58 116 aa11□□□□□ -0.65
VRK3-205ENST00000593919 GLIPR1P48060 266 aa11□□□□□ -0.65
VRK3-205ENST00000593919 HLA-DRB3P79483 266 aa11□□□□□ -0.65
VRK3-205ENST00000593919 PAX5Q02548 391 aa11□□□□□ -0.65
VRK3-205ENST00000593919 EDDM3AQ14507 147 aa11□□□□□ -0.65
VRK3-205ENST00000593919 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
VRK3-205ENST00000593919 CCL13Q99616 98 aa11□□□□□ -0.65
VRK3-205ENST00000593919 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
VRK3-205ENST00000593919 PPIAL4AQ9Y536 164 aa11□□□□□ -0.65
VRK3-205ENST00000593919 DOPEY2Q9Y3R5 2298 aa11□□□□□ -0.65
VRK3-205ENST00000593919 ARID1AO14497 2285 aa11□□□□□ -0.65
VRK3-205ENST00000593919 YLPM1P49750 1951 aaKnown RBP10.99□□□□□ -0.65
VRK3-205ENST00000593919 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 BET1O15155 118 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 LY6HO94772 140 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 CLDN1O95832 211 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 TK1P04183 234 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 LYL1P12980 280 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 COL8A2P25067 703 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 IL15RAQ13261 267 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 TMEM187Q14656 261 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 FAM216BQ8N7L0 139 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 PPP1R35Q8TAP8 253 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 PHYHIPLQ96FC7 376 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 NARFLQ9H6Q4 476 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 A1L4Q6 167 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 MGST3O14880 152 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 TMPRSS2O15393 492 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 PPYP01298 95 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 M6PRP20645 277 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 CDKN1AP38936 164 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 PRR18Q8N4B5 295 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 KIRREL1Q96J84 757 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
VRK3-205ENST00000593919 MEX3AA1L020 520 aaKnown RBP10.98□□□□□ -0.65
VRK3-205ENST00000593919 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 UCP3P55916 312 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 OR4A4PQ8NGN8 299 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 UBALD1Q8TB05 177 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 RSRP1Q9BUV0 290 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 TAF9BQ9HBM6 251 aa10.98□□□□□ -0.65
VRK3-205ENST00000593919 LSM5Q9Y4Y9 91 aaKnown RBP10.98□□□□□ -0.65
VRK3-205ENST00000593919 NKX6-3A6NJ46 265 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 PHF1O43189 567 aaPredicted RBP10.97□□□□□ -0.65
VRK3-205ENST00000593919 TPT1P13693 172 aaKnown RBP10.97□□□□□ -0.65
VRK3-205ENST00000593919 ZP3P21754 424 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 EDDM3BP56851 147 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 SMCO1Q147U7 214 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 HMGN3Q15651 99 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 ARL6IP6Q8N6S5 226 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 CCDC71LQ8N9Z2 235 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 OR13A1Q8NGR1 328 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 STOML3Q8TAV4 291 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 MRGPRDQ8TDS7 321 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 NEU4Q8WWR8 484 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms