RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 NKAIN3Q8N8D7 197 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 NABP2Q9BQ15 211 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 ANKRD60Q9BZ19 345 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 ISYNA1Q9NPH2 558 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 IGHV7-81A0A0B4J1V7 117 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 PNMA8CA0A1B0GUJ8 204 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 PDCD6O75340 191 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 BAG2O95816 211 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 IGLV1-40P01703 118 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 CNTFRP26992 372 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 RAB9AP51151 201 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 GNB1P62873 340 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 HTD2P86397 168 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 KIAA0141Q14154 515 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-203ENST00000593641 DOC2BQ14184 412 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 C5orf64Q2M2E5 130 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 ASPHD1Q5U4P2 390 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 ODF3L1Q8IXM7 274 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 MRPL30Q8TCC3 161 aaKnown RBP17.6■□□□□ 0.41
SSBP4-203ENST00000593641 ERGIC3Q9Y282 383 aa17.6■□□□□ 0.41
SSBP4-203ENST00000593641 OVOL1O14753 267 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 YPEL1O60688 119 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 BLVRBP30043 206 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-203ENST00000593641 SIGIRRQ6IA17 410 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 LIN54Q6MZP7 749 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 ZNF833PQ6ZTB9 187 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 SETD9Q8NE22 299 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 OR2AK2Q8NG84 335 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 FAM46BQ96A09 425 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 GALMQ96C23 342 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 RITA1Q96K30 269 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 DERL3Q96Q80 235 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 YPEL2Q96QA6 119 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 UQCC2Q9BRT2 126 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 CST11Q9H112 138 aa17.59■□□□□ 0.41
SSBP4-203ENST00000593641 DNAH7Q8WXX0 4024 aa17.58■□□□□ 0.41
SSBP4-203ENST00000593641 SAA2-SAA4A0A096LPE2 208 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 SAA2P0DJI9 122 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-203ENST00000593641 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-203ENST00000593641 ECSCRQ19T08 205 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 CYGBQ8WWM9 190 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 DCUN1D4Q92564 292 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 THRSPQ92748 146 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 GHRLQ9UBU3 117 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 LRRC42Q9Y546 428 aa17.58■□□□□ 0.4
SSBP4-203ENST00000593641 SAP30O75446 220 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 MAPK3P27361 379 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-203ENST00000593641 OR3A3P47888 321 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 LY6G6FQ5SQ64 297 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 TTC23Q5W5X9 447 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 MINDY2Q8NBR6 621 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 ZNF485Q8NCK3 441 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 NPBQ8NG41 125 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 NEDD4LQ96PU5 975 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 ABRACLQ9P1F3 81 aa17.57■□□□□ 0.4
SSBP4-203ENST00000593641 A0A1W2PN81 502 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 NDUFA3O95167 84 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 CHRNA7P36544 502 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 ST3GAL4Q11206 333 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 FAM71F2Q6NXP2 309 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 C5orf24Q7Z6I8 188 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 LYPD6Q86Y78 171 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 CYYR1Q96J86 154 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 GHITMQ9H3K2 345 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 STEAP1Q9UHE8 339 aa17.56■□□□□ 0.4
SSBP4-203ENST00000593641 LINC01619G3V211 115 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 MYL12BO14950 172 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 CELP19835 753 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 PLGLAQ15195 96 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 C6orf141Q5SZD1 244 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 FAM131AQ6UXB0 335 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 TCTEX1D1Q8N7M0 179 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 MUC7Q8TAX7 377 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 IL1F10Q8WWZ1 152 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 GGHQ92820 318 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 RCHY1Q96PM5 261 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 ALX4Q9H161 411 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-203ENST00000593641 PIPOXQ9P0Z9 390 aa17.55■□□□□ 0.4
SSBP4-203ENST00000593641 FOXA2Q9Y261 457 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-203ENST00000593641 EFCAB10A6NFE3 127 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 UBBP0CG47 229 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 NDPQ00604 133 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 HMGN3Q15651 99 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 ZNF660Q6AZW8 331 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-203ENST00000593641 SBSPONQ8IVN8 264 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 OR6Q1Q8NGQ2 317 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 ABHD5Q8WTS1 349 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 DLX4Q92988 240 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-203ENST00000593641 SULT4A1Q9BR01 284 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 TOLLIPQ9H0E2 274 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 IFI27L2Q9H2X8 130 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 A3GALT2U3KPV4 340 aa17.54■□□□□ 0.4
SSBP4-203ENST00000593641 DYNC2H1Q8NCM8 4307 aaKnown RBP17.54■□□□□ 0.4
SSBP4-203ENST00000593641 RAB29O14966 203 aa17.53■□□□□ 0.4
SSBP4-203ENST00000593641 ST8SIA5O15466 376 aa17.53■□□□□ 0.4
SSBP4-203ENST00000593641 CD1AP06126 327 aa17.53■□□□□ 0.4
SSBP4-203ENST00000593641 LGALS1P09382 135 aaKnown RBP17.53■□□□□ 0.4
SSBP4-203ENST00000593641 SPNP16150 400 aa17.53■□□□□ 0.4
SSBP4-203ENST00000593641 SLURP1P55000 103 aa17.53■□□□□ 0.4
SSBP4-203ENST00000593641 FBXO7Q9Y3I1 522 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms