RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TMEM65Q6PI78 240 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 Q8N6K4 173 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 OR13F1Q8NGS4 319 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 S1PR3Q99500 378 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 S100A13Q99584 98 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 HSPB9Q9BQS6 159 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 CHCHD6Q9BRQ6 235 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 BARHL1Q9BZE3 327 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 OR51E2Q9H255 320 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 GNB4Q9HAV0 340 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 KIF25Q9UIL4 384 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 VSIG4Q9Y279 399 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 LOC100506127A0A0U1RQW1 187 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 I3L521 148 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 PDCD5O14737 125 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ZNF780AO75290 641 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-215ENST00000583328 MOSP00540 346 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 OR5H8P0DN80 308 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 SOX6P35712 828 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ALDH3B2P48448 385 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 MTNR1BP49286 362 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 VEGFCP49767 419 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 PSMD7P51665 324 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 RSU1Q15404 277 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 SRSF7Q16629 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
TOP3A-215ENST00000583328 C1orf100Q5SVJ3 147 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ASPHD1Q5U4P2 390 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ELP2Q6IA86 826 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-215ENST00000583328 SLC16A12Q6ZSM3 486 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 IZUMO1Q8IYV9 350 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 OR51T1Q8NGJ9 327 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 OR6Q1Q8NGQ2 317 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 MRGPRDQ8TDS7 321 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 METTL9Q9H1A3 318 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 GHITMQ9H3K2 345 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 LINC00574Q9H8X3 128 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 PLSCR3Q9NRY6 295 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 ING4Q9UNL4 249 aa9.55□□□□□ -0.88
TOP3A-215ENST00000583328 MRPS28Q9Y2Q9 187 aaKnown RBP9.55□□□□□ -0.88
TOP3A-215ENST00000583328 SHISA3A0PJX4 238 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 AIREO43918 545 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 CDRT1O95170 752 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 TFAP2AP05549 437 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 UBBP0CG47 229 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 CD1BP29016 333 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 RANBP1P43487 201 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 GNB1P62873 340 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 RUNX1Q01196 453 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 GPR176Q14439 515 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 PAN3Q58A45 887 aaKnown RBP9.54□□□□□ -0.88
TOP3A-215ENST00000583328 AWAT2Q6E213 333 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 OR10A7Q8NGE5 316 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 OR6M1Q8NGM8 313 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 GFI1Q99684 422 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 GHRLQ9UBU3 117 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 AK6Q9Y3D8 172 aaKnown RBP9.54□□□□□ -0.88
TOP3A-215ENST00000583328 V9GY05 133 aa9.54□□□□□ -0.88
TOP3A-215ENST00000583328 STARD9Q9P2P6 4700 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 SLC17A2O00624 439 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 SLC22A1O15245 554 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 HTR3BO95264 441 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 CSTBP04080 98 aaKnown RBP9.53□□□□□ -0.88
TOP3A-215ENST00000583328 IGF1P05019 195 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 RAB3BP20337 219 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 SERPINA2P20848 420 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 HTR2CP28335 458 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 KIAA0141Q14154 515 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-215ENST00000583328 SLC22A6Q4U2R8 563 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 GPR141Q7Z602 305 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 TPRA1Q86W33 373 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 OR10K1Q8NGX5 313 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 MYOZ3Q8TDC0 251 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-215ENST00000583328 CENPOQ9BU64 300 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 FUNDC2Q9BWH2 189 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 PLGRKTQ9HBL7 147 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 WSB1Q9Y6I7 421 aa9.53□□□□□ -0.88
TOP3A-215ENST00000583328 TRAV39A0A0B4J263 110 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 BPNT1O95861 308 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 GTF2F2P13984 249 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 IL3RAP26951 378 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 SSTR5P35346 364 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 RPL5P46777 297 aaKnown RBP9.52□□□□□ -0.89
TOP3A-215ENST00000583328 F2RL1P55085 397 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 IL13RA2Q14627 380 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 RAB11BQ15907 218 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 NHLRC3Q5JS37 347 aa9.52□□□□□ -0.89
TOP3A-215ENST00000583328 FAM71E2Q8N5Q1 922 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms