RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ORM1P02763 201 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 GRPRP30550 384 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 ACTR1BP42025 376 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 CRATP43155 626 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 ZNF140P52738 457 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 SPATA31B1PQ5VZV4 182 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 PDPK2PQ6A1A2 396 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 DOLPP1Q86YN1 238 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 LFNGQ8NES3 379 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 SPPL2BQ8TCT7 592 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 TXNDC17Q9BRA2 123 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 LLPHQ9BRT6 129 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 C1QTNF6Q9BXI9 259 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 AICDAQ9GZX7 198 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 GTSF1LQ9H1H1 148 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 IMP3Q9NV31 184 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 COMMD9Q9P000 198 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 CCL26Q9Y258 94 aa1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 MRPS16Q9Y3D3 137 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-204ENST00000581226 SLC25A20O43772 301 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 ATF1P18846 271 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 GTF2BQ00403 316 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 TBC1D28Q2M2D7 210 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 TRMT12Q53H54 448 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 ZNF767PQ75MW2 155 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 OR10P1Q8NGE3 313 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 GPR119Q8TDV5 335 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 DTD1Q8TEA8 209 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 DNAJB3Q8WWF6 145 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 GALMQ96C23 342 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 TTTY12Q9BZ98 90 aa1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 NYNRINQ9P2P1 1898 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-204ENST00000581226 LOC102725191A0A1B0GVB3 256 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 IGSF23A1L1A6 192 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 FTCDNL1E5RQL4 147 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 LY6LH3BQJ8 138 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 M0QYV0 167 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 COCHO43405 550 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 PLCH2O75038 1416 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 S1PR2O95136 353 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 GADD45AP24522 165 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 BLVRBP30043 206 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 ADORA1P30542 326 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 PSMB3P49720 205 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 RPL14P50914 215 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 SKP1P63208 163 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 EXOC3L4Q17RC7 722 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 SPATA24Q86W54 205 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 TNFAIP8L1Q8WVP5 186 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 LRRC45Q96CN5 670 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 MBOAT7Q96N66 472 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 CHMP4BQ9H444 224 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 RIMS2Q9UQ26 1411 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 TP53TG1Q9Y2A0 90 aa1.53□□□□□ -2.16
SMCHD1-204ENST00000581226 MUC6Q6W4X9 2439 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 PRB1P04280 392 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 GABRA3P34903 492 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 RCVRNP35243 200 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 SULT1A2P50226 295 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 DAPP51397 102 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 TSPAN31Q12999 210 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 TTC33Q6PID6 262 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 DRAM2Q6UX65 266 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 FUNDC1Q8IVP5 155 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 STOML3Q8TAV4 291 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 CCDC12Q8WUD4 166 aaPredicted RBP1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 PPCDCQ96CD2 204 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 ZNF426Q9BUY5 554 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 NDEL1Q9GZM8 345 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 SCN9AQ15858 1988 aa1.52□□□□□ -2.17
SMCHD1-204ENST00000581226 ADGRB3O60242 1522 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 C19orf71A6NCJ1 209 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 KNCNA6PVL3 124 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 A8MWP6 167 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 ODF3BA8MYP8 253 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 B4DEV8 164 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 H3BSA7 217 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 ITGB1BP1O14713 200 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 ATP8B1O43520 1251 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 IGHV3-30-3P0DP02 117 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 CPMP14384 443 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 PVALBP20472 110 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 PSMA1P25786 263 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 GABARAPL2P60520 117 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 FGF12P61328 243 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 C1DQ13901 141 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 PLCZ1Q86YW0 608 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 OTUD6BQ8N6M0 293 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 OR52E4Q8NGH9 312 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 OR4C16Q8NGL9 310 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 OR5K1Q8NHB7 308 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 UBQLN4Q9NRR5 601 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 TMEM216Q9P0N5 145 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 LINC00527Q9UJ94 153 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 STRCP1A6NGW2 1772 aa1.51□□□□□ -2.17
SMCHD1-204ENST00000581226 SLX4Q8IY92 1834 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 COL4A2P08572 1712 aa1.5□□□□□ -2.17
SMCHD1-204ENST00000581226 GOLGA6L10A6NI86 522 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms